Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RFPL1O75677 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
RFPL1O75677 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RFPL1O75677 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RFPL1O75677 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RFPL1O75677 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RFPL1O75677 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.64■□□□□ 0.9
RFPL1O75677 AC112907.3-201ENST00000577781 2400 ntBASIC20.64■□□□□ 0.89
RFPL1O75677 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.64■□□□□ 0.89
RFPL1O75677 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.64■□□□□ 0.89
RFPL1O75677 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.64■□□□□ 0.89
RFPL1O75677 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
RFPL1O75677 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.64■□□□□ 0.89
RFPL1O75677 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.64■□□□□ 0.89
RFPL1O75677 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFPL1O75677 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFPL1O75677 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
RFPL1O75677 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.64■□□□□ 0.89
RFPL1O75677 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFPL1O75677 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFPL1O75677 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RFPL1O75677 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFPL1O75677 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFPL1O75677 AC011484.1-201ENST00000377652 1995 ntBASIC20.63■□□□□ 0.89
RFPL1O75677 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFPL1O75677 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFPL1O75677 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RFPL1O75677 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFPL1O75677 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFPL1O75677 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFPL1O75677 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RFPL1O75677 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFPL1O75677 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RFPL1O75677 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.63■□□□□ 0.89
RFPL1O75677 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFPL1O75677 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.63■□□□□ 0.89
RFPL1O75677 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.63■□□□□ 0.89
RFPL1O75677 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFPL1O75677 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RFPL1O75677 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFPL1O75677 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFPL1O75677 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RFPL1O75677 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RFPL1O75677 AC007952.6-201ENST00000573168 2673 ntBASIC20.62■□□□□ 0.89
RFPL1O75677 AC003957.1-201ENST00000625108 2673 ntBASIC20.62■□□□□ 0.89
RFPL1O75677 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RFPL1O75677 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFPL1O75677 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.62■□□□□ 0.89
RFPL1O75677 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.62■□□□□ 0.89
RFPL1O75677 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.62■□□□□ 0.89
RFPL1O75677 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFPL1O75677 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.62■□□□□ 0.89
RFPL1O75677 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFPL1O75677 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.62■□□□□ 0.89
RFPL1O75677 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.62■□□□□ 0.89
RFPL1O75677 EEF1DP3-203ENST00000566025 782 ntBASIC20.62■□□□□ 0.89
RFPL1O75677 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.62■□□□□ 0.89
RFPL1O75677 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.62■□□□□ 0.89
RFPL1O75677 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RFPL1O75677 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RFPL1O75677 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFPL1O75677 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFPL1O75677 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFPL1O75677 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFPL1O75677 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFPL1O75677 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.61■□□□□ 0.89
RFPL1O75677 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RFPL1O75677 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFPL1O75677 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFPL1O75677 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFPL1O75677 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFPL1O75677 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFPL1O75677 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.61■□□□□ 0.89
RFPL1O75677 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFPL1O75677 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.61■□□□□ 0.89
RFPL1O75677 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.61■□□□□ 0.89
RFPL1O75677 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFPL1O75677 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.61■□□□□ 0.89
RFPL1O75677 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFPL1O75677 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.61■□□□□ 0.89
RFPL1O75677 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFPL1O75677 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RFPL1O75677 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RFPL1O75677 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RFPL1O75677 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFPL1O75677 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFPL1O75677 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RFPL1O75677 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
RFPL1O75677 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.6■□□□□ 0.89
RFPL1O75677 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFPL1O75677 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RFPL1O75677 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFPL1O75677 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFPL1O75677 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFPL1O75677 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.6■□□□□ 0.89
RFPL1O75677 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.6■□□□□ 0.89
RFPL1O75677 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFPL1O75677 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.6■□□□□ 0.89
RFPL1O75677 AC099778.1-201ENST00000568593 1911 ntBASIC20.6■□□□□ 0.89
RFPL1O75677 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms