Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
NDUFS3O75489 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NDUFS3O75489 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.49■□□□□ 0.87
NDUFS3O75489 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
NDUFS3O75489 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NDUFS3O75489 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.49■□□□□ 0.87
NDUFS3O75489 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.49■□□□□ 0.87
NDUFS3O75489 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
NDUFS3O75489 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NDUFS3O75489 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NDUFS3O75489 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NDUFS3O75489 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
NDUFS3O75489 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NDUFS3O75489 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NDUFS3O75489 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NDUFS3O75489 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.48■□□□□ 0.87
NDUFS3O75489 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.48■□□□□ 0.87
NDUFS3O75489 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
NDUFS3O75489 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.48■□□□□ 0.87
NDUFS3O75489 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.48■□□□□ 0.87
NDUFS3O75489 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.48■□□□□ 0.87
NDUFS3O75489 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.48■□□□□ 0.87
NDUFS3O75489 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.48■□□□□ 0.87
NDUFS3O75489 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.48■□□□□ 0.87
NDUFS3O75489 MIR5787-201ENST00000611784 55 ntBASIC20.48■□□□□ 0.87
NDUFS3O75489 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NDUFS3O75489 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.48■□□□□ 0.87
NDUFS3O75489 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.48■□□□□ 0.87
NDUFS3O75489 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NDUFS3O75489 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NDUFS3O75489 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NDUFS3O75489 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NDUFS3O75489 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NDUFS3O75489 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NDUFS3O75489 AC007225.1-201ENST00000566331 1836 ntBASIC20.48■□□□□ 0.87
NDUFS3O75489 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NDUFS3O75489 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NDUFS3O75489 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NDUFS3O75489 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.47■□□□□ 0.87
NDUFS3O75489 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.47■□□□□ 0.87
NDUFS3O75489 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NDUFS3O75489 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.47■□□□□ 0.87
NDUFS3O75489 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NDUFS3O75489 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
NDUFS3O75489 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NDUFS3O75489 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
NDUFS3O75489 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
NDUFS3O75489 FP700111.2-201ENST00000619190 1892 ntBASIC20.47■□□□□ 0.87
NDUFS3O75489 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
NDUFS3O75489 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NDUFS3O75489 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
NDUFS3O75489 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
NDUFS3O75489 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.47■□□□□ 0.87
NDUFS3O75489 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NDUFS3O75489 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NDUFS3O75489 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDUFS3O75489 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDUFS3O75489 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDUFS3O75489 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDUFS3O75489 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDUFS3O75489 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDUFS3O75489 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NDUFS3O75489 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.46■□□□□ 0.87
NDUFS3O75489 AL157384.1-201ENST00000445995 2473 ntBASIC20.46■□□□□ 0.87
NDUFS3O75489 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NDUFS3O75489 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
NDUFS3O75489 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NDUFS3O75489 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.46■□□□□ 0.87
NDUFS3O75489 KRT18P11-201ENST00000435214 1283 ntBASIC20.46■□□□□ 0.87
NDUFS3O75489 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NDUFS3O75489 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.46■□□□□ 0.87
NDUFS3O75489 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
NDUFS3O75489 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NDUFS3O75489 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDUFS3O75489 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDUFS3O75489 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.46■□□□□ 0.87
NDUFS3O75489 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NDUFS3O75489 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NDUFS3O75489 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NDUFS3O75489 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NDUFS3O75489 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NDUFS3O75489 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NDUFS3O75489 FEM1AP1-201ENST00000431297 1995 ntBASIC20.45■□□□□ 0.86
NDUFS3O75489 AC016769.1-201ENST00000409132 1010 ntBASIC20.45■□□□□ 0.86
NDUFS3O75489 AC091799.1-201ENST00000422823 811 ntBASIC20.45■□□□□ 0.86
NDUFS3O75489 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
NDUFS3O75489 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
NDUFS3O75489 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.45■□□□□ 0.86
NDUFS3O75489 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
NDUFS3O75489 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.45■□□□□ 0.86
NDUFS3O75489 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
NDUFS3O75489 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.45■□□□□ 0.86
NDUFS3O75489 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
NDUFS3O75489 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NDUFS3O75489 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NDUFS3O75489 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NDUFS3O75489 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDUFS3O75489 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDUFS3O75489 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDUFS3O75489 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms