Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.55■□□□□ 0.88
GPC4O75487 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GPC4O75487 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.55■□□□□ 0.88
GPC4O75487 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.55■□□□□ 0.88
GPC4O75487 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GPC4O75487 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GPC4O75487 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GPC4O75487 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
GPC4O75487 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GPC4O75487 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GPC4O75487 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GPC4O75487 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC4O75487 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC4O75487 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.54■□□□□ 0.88
GPC4O75487 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GPC4O75487 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC4O75487 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC4O75487 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.54■□□□□ 0.88
GPC4O75487 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
GPC4O75487 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GPC4O75487 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC4O75487 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.54■□□□□ 0.88
GPC4O75487 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC4O75487 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
GPC4O75487 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.54■□□□□ 0.88
GPC4O75487 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC4O75487 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GPC4O75487 KRT16P2-201ENST00000414673 1423 ntBASIC20.53■□□□□ 0.88
GPC4O75487 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
GPC4O75487 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GPC4O75487 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
GPC4O75487 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GPC4O75487 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
GPC4O75487 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
GPC4O75487 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GPC4O75487 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GPC4O75487 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
GPC4O75487 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GPC4O75487 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.53■□□□□ 0.88
GPC4O75487 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GPC4O75487 SLC7A5P2-201ENST00000553010 536 ntBASIC20.53■□□□□ 0.88
GPC4O75487 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
GPC4O75487 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GPC4O75487 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
GPC4O75487 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
GPC4O75487 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
GPC4O75487 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GPC4O75487 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GPC4O75487 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GPC4O75487 AL049796.1-201ENST00000565336 1766 ntBASIC20.52■□□□□ 0.88
GPC4O75487 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GPC4O75487 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.52■□□□□ 0.88
GPC4O75487 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
GPC4O75487 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GPC4O75487 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GPC4O75487 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GPC4O75487 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GPC4O75487 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GPC4O75487 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GPC4O75487 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
GPC4O75487 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GPC4O75487 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.52■□□□□ 0.88
GPC4O75487 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.52■□□□□ 0.88
GPC4O75487 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.52■□□□□ 0.88
GPC4O75487 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.52■□□□□ 0.88
GPC4O75487 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.52■□□□□ 0.88
GPC4O75487 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GPC4O75487 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
GPC4O75487 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GPC4O75487 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
GPC4O75487 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
GPC4O75487 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.51■□□□□ 0.87
GPC4O75487 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GPC4O75487 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GPC4O75487 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GPC4O75487 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.51■□□□□ 0.87
GPC4O75487 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GPC4O75487 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
GPC4O75487 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GPC4O75487 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.51■□□□□ 0.87
GPC4O75487 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.51■□□□□ 0.87
GPC4O75487 SLC7A5P1-201ENST00000568957 537 ntBASIC20.51■□□□□ 0.87
GPC4O75487 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
GPC4O75487 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
GPC4O75487 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GPC4O75487 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GPC4O75487 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GPC4O75487 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GPC4O75487 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GPC4O75487 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.5■□□□□ 0.87
GPC4O75487 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.5■□□□□ 0.87
GPC4O75487 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GPC4O75487 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
GPC4O75487 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.5■□□□□ 0.87
GPC4O75487 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.5■□□□□ 0.87
GPC4O75487 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
GPC4O75487 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.5■□□□□ 0.87
GPC4O75487 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
GPC4O75487 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GPC4O75487 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms