Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 AC142381.2-201ENST00000566120 298 ntBASIC23.87■■□□□ 1.41
PRPF40AO75400 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.87■■□□□ 1.41
PRPF40AO75400 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.87■■□□□ 1.41
PRPF40AO75400 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
PRPF40AO75400 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PRPF40AO75400 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
PRPF40AO75400 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PRPF40AO75400 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
PRPF40AO75400 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
PRPF40AO75400 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23.87■■□□□ 1.41
PRPF40AO75400 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC23.87■■□□□ 1.41
PRPF40AO75400 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PRPF40AO75400 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.86■■□□□ 1.41
PRPF40AO75400 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PRPF40AO75400 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
PRPF40AO75400 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PRPF40AO75400 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
PRPF40AO75400 BX005040.4-201ENST00000637145 1518 ntBASIC23.86■■□□□ 1.41
PRPF40AO75400 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.86■■□□□ 1.41
PRPF40AO75400 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.86■■□□□ 1.41
PRPF40AO75400 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.86■■□□□ 1.41
PRPF40AO75400 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PRPF40AO75400 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC23.86■■□□□ 1.41
PRPF40AO75400 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PRPF40AO75400 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC23.86■■□□□ 1.41
PRPF40AO75400 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC23.86■■□□□ 1.41
PRPF40AO75400 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
PRPF40AO75400 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.85■■□□□ 1.41
PRPF40AO75400 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PRPF40AO75400 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PRPF40AO75400 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.85■■□□□ 1.41
PRPF40AO75400 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PRPF40AO75400 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PRPF40AO75400 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.85■■□□□ 1.41
PRPF40AO75400 AL031432.3-201ENST00000607698 485 ntBASIC23.85■■□□□ 1.41
PRPF40AO75400 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.85■■□□□ 1.41
PRPF40AO75400 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PRPF40AO75400 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.85■■□□□ 1.41
PRPF40AO75400 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PRPF40AO75400 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
PRPF40AO75400 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.85■■□□□ 1.41
PRPF40AO75400 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PRPF40AO75400 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRPF40AO75400 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRPF40AO75400 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRPF40AO75400 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
PRPF40AO75400 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.84■■□□□ 1.41
PRPF40AO75400 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.84■■□□□ 1.41
PRPF40AO75400 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
PRPF40AO75400 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.84■■□□□ 1.41
PRPF40AO75400 AL355001.2-201ENST00000620617 1191 ntBASIC23.84■■□□□ 1.41
PRPF40AO75400 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRPF40AO75400 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC23.84■■□□□ 1.41
PRPF40AO75400 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC23.84■■□□□ 1.41
PRPF40AO75400 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.84■■□□□ 1.41
PRPF40AO75400 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PRPF40AO75400 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.83■■□□□ 1.41
PRPF40AO75400 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
PRPF40AO75400 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PRPF40AO75400 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.41
PRPF40AO75400 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PRPF40AO75400 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PRPF40AO75400 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PRPF40AO75400 SUDS3P1-201ENST00000505831 966 ntBASIC23.83■■□□□ 1.41
PRPF40AO75400 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.83■■□□□ 1.41
PRPF40AO75400 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.83■■□□□ 1.41
PRPF40AO75400 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.83■■□□□ 1.41
PRPF40AO75400 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PRPF40AO75400 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PRPF40AO75400 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
PRPF40AO75400 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
PRPF40AO75400 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
PRPF40AO75400 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
PRPF40AO75400 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC23.82■■□□□ 1.4
PRPF40AO75400 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC23.82■■□□□ 1.4
PRPF40AO75400 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRPF40AO75400 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
PRPF40AO75400 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PRPF40AO75400 MIR935-201ENST00000401179 91 ntBASIC23.82■■□□□ 1.4
PRPF40AO75400 BX842568.3-201ENST00000418104 571 ntBASIC23.82■■□□□ 1.4
PRPF40AO75400 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.82■■□□□ 1.4
PRPF40AO75400 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.82■■□□□ 1.4
PRPF40AO75400 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRPF40AO75400 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRPF40AO75400 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRPF40AO75400 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC23.82■■□□□ 1.4
PRPF40AO75400 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.82■■□□□ 1.4
PRPF40AO75400 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.82■■□□□ 1.4
PRPF40AO75400 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRPF40AO75400 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC23.82■■□□□ 1.4
PRPF40AO75400 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
PRPF40AO75400 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PRPF40AO75400 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PRPF40AO75400 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PRPF40AO75400 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.81■■□□□ 1.4
PRPF40AO75400 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PRPF40AO75400 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PRPF40AO75400 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PRPF40AO75400 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PRPF40AO75400 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms