Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.87■□□□□ 0.77
CNOT3O75175 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNOT3O75175 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.87■□□□□ 0.77
CNOT3O75175 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNOT3O75175 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.87■□□□□ 0.77
CNOT3O75175 AL121832.2-201ENST00000610979 668 ntBASIC19.87■□□□□ 0.77
CNOT3O75175 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.87■□□□□ 0.77
CNOT3O75175 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CNOT3O75175 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNOT3O75175 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNOT3O75175 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CNOT3O75175 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNOT3O75175 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CNOT3O75175 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CNOT3O75175 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.86■□□□□ 0.77
CNOT3O75175 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.86■□□□□ 0.77
CNOT3O75175 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNOT3O75175 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
CNOT3O75175 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNOT3O75175 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNOT3O75175 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNOT3O75175 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.85■□□□□ 0.77
CNOT3O75175 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CNOT3O75175 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNOT3O75175 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNOT3O75175 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CNOT3O75175 AC010542.4-201ENST00000563151 1910 ntBASIC19.85■□□□□ 0.77
CNOT3O75175 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.85■□□□□ 0.77
CNOT3O75175 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.85■□□□□ 0.77
CNOT3O75175 TERF1P5-201ENST00000477545 1207 ntBASIC19.85■□□□□ 0.77
CNOT3O75175 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.85■□□□□ 0.77
CNOT3O75175 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNOT3O75175 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.85■□□□□ 0.77
CNOT3O75175 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNOT3O75175 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.85■□□□□ 0.77
CNOT3O75175 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNOT3O75175 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNOT3O75175 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNOT3O75175 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNOT3O75175 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
CNOT3O75175 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.85■□□□□ 0.77
CNOT3O75175 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNOT3O75175 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.84■□□□□ 0.77
CNOT3O75175 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNOT3O75175 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNOT3O75175 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNOT3O75175 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNOT3O75175 AC061975.6-201ENST00000579045 1553 ntBASIC19.84■□□□□ 0.77
CNOT3O75175 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNOT3O75175 TSPY6P-201ENST00000448518 926 ntBASIC19.84■□□□□ 0.77
CNOT3O75175 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.84■□□□□ 0.77
CNOT3O75175 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNOT3O75175 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.84■□□□□ 0.77
CNOT3O75175 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNOT3O75175 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNOT3O75175 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.84■□□□□ 0.77
CNOT3O75175 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CNOT3O75175 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNOT3O75175 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CNOT3O75175 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.83■□□□□ 0.77
CNOT3O75175 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNOT3O75175 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.83■□□□□ 0.77
CNOT3O75175 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNOT3O75175 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.83■□□□□ 0.77
CNOT3O75175 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.83■□□□□ 0.77
CNOT3O75175 AC008175.2-201ENST00000612840 297 ntBASIC19.83■□□□□ 0.77
CNOT3O75175 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.83■□□□□ 0.77
CNOT3O75175 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNOT3O75175 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.83■□□□□ 0.76
CNOT3O75175 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNOT3O75175 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNOT3O75175 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNOT3O75175 AC068338.2-201ENST00000563278 1430 ntBASIC19.83■□□□□ 0.76
CNOT3O75175 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.83■□□□□ 0.76
CNOT3O75175 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CNOT3O75175 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CNOT3O75175 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNOT3O75175 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.83■□□□□ 0.76
CNOT3O75175 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CNOT3O75175 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.83■□□□□ 0.76
CNOT3O75175 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CNOT3O75175 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.83■□□□□ 0.76
CNOT3O75175 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CNOT3O75175 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNOT3O75175 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.82■□□□□ 0.76
CNOT3O75175 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
CNOT3O75175 AC142086.2-201ENST00000569753 217 ntBASIC19.82■□□□□ 0.76
CNOT3O75175 AC013268.1-206ENST00000638368 961 ntBASIC19.82■□□□□ 0.76
CNOT3O75175 AC112229.1-201ENST00000639295 961 ntBASIC19.82■□□□□ 0.76
CNOT3O75175 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNOT3O75175 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
CNOT3O75175 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.82■□□□□ 0.76
CNOT3O75175 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CNOT3O75175 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNOT3O75175 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNOT3O75175 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.82■□□□□ 0.76
CNOT3O75175 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNOT3O75175 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.82■□□□□ 0.76
CNOT3O75175 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNOT3O75175 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms