Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEF11O60813 AC010980.2-201ENST00000587099 1412 ntBASIC20.92■□□□□ 0.94
PRAMEF11O60813 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.92■□□□□ 0.94
PRAMEF11O60813 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEF11O60813 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.92■□□□□ 0.94
PRAMEF11O60813 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEF11O60813 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRAMEF11O60813 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRAMEF11O60813 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRAMEF11O60813 CYP21A1P-202ENST00000354927 1481 ntBASIC20.91■□□□□ 0.94
PRAMEF11O60813 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PRAMEF11O60813 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PRAMEF11O60813 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PRAMEF11O60813 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRAMEF11O60813 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.91■□□□□ 0.94
PRAMEF11O60813 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.91■□□□□ 0.94
PRAMEF11O60813 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.91■□□□□ 0.94
PRAMEF11O60813 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PRAMEF11O60813 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRAMEF11O60813 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRAMEF11O60813 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.91■□□□□ 0.94
PRAMEF11O60813 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEF11O60813 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEF11O60813 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEF11O60813 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.9■□□□□ 0.94
PRAMEF11O60813 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEF11O60813 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEF11O60813 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEF11O60813 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEF11O60813 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.9■□□□□ 0.94
PRAMEF11O60813 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEF11O60813 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEF11O60813 GPX1P1-201ENST00000388829 606 ntBASIC20.9■□□□□ 0.94
PRAMEF11O60813 MCRIP2P1-201ENST00000394346 511 ntBASIC20.9■□□□□ 0.94
PRAMEF11O60813 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.9■□□□□ 0.94
PRAMEF11O60813 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.9■□□□□ 0.94
PRAMEF11O60813 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.9■□□□□ 0.94
PRAMEF11O60813 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.9■□□□□ 0.94
PRAMEF11O60813 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.9■□□□□ 0.94
PRAMEF11O60813 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.9■□□□□ 0.94
PRAMEF11O60813 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PRAMEF11O60813 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.9■□□□□ 0.94
PRAMEF11O60813 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.9■□□□□ 0.94
PRAMEF11O60813 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEF11O60813 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.9■□□□□ 0.94
PRAMEF11O60813 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
PRAMEF11O60813 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEF11O60813 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.9■□□□□ 0.94
PRAMEF11O60813 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PRAMEF11O60813 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.89■□□□□ 0.94
PRAMEF11O60813 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
PRAMEF11O60813 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PRAMEF11O60813 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.89■□□□□ 0.93
PRAMEF11O60813 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRAMEF11O60813 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRAMEF11O60813 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
PRAMEF11O60813 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PRAMEF11O60813 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PRAMEF11O60813 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
PRAMEF11O60813 GUSBP6-202ENST00000438529 1198 ntBASIC20.89■□□□□ 0.93
PRAMEF11O60813 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.89■□□□□ 0.93
PRAMEF11O60813 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.89■□□□□ 0.93
PRAMEF11O60813 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRAMEF11O60813 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.89■□□□□ 0.93
PRAMEF11O60813 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.89■□□□□ 0.93
PRAMEF11O60813 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.89■□□□□ 0.93
PRAMEF11O60813 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRAMEF11O60813 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PRAMEF11O60813 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PRAMEF11O60813 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PRAMEF11O60813 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
PRAMEF11O60813 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.89■□□□□ 0.93
PRAMEF11O60813 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF11O60813 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF11O60813 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF11O60813 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF11O60813 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.88■□□□□ 0.93
PRAMEF11O60813 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF11O60813 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF11O60813 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF11O60813 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.88■□□□□ 0.93
PRAMEF11O60813 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF11O60813 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.88■□□□□ 0.93
PRAMEF11O60813 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF11O60813 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PRAMEF11O60813 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF11O60813 MKRN4P-201ENST00000444706 1521 ntBASIC20.88■□□□□ 0.93
PRAMEF11O60813 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.88■□□□□ 0.93
PRAMEF11O60813 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PRAMEF11O60813 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF11O60813 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF11O60813 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF11O60813 AC087633.2-202ENST00000565166 1439 ntBASIC20.87■□□□□ 0.93
PRAMEF11O60813 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF11O60813 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.87■□□□□ 0.93
PRAMEF11O60813 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF11O60813 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF11O60813 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
PRAMEF11O60813 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF11O60813 TSPY6P-201ENST00000448518 926 ntBASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms