Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF2O60811 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.3■□□□□ 0.68
PRAMEF2O60811 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.3■□□□□ 0.68
PRAMEF2O60811 AC069152.1-201ENST00000438030 544 ntBASIC19.3■□□□□ 0.68
PRAMEF2O60811 KRT18P6-201ENST00000555540 1265 ntBASIC19.3■□□□□ 0.68
PRAMEF2O60811 AC008694.1-202ENST00000636953 945 ntBASIC19.3■□□□□ 0.68
PRAMEF2O60811 AC133041.1-202ENST00000642053 222 ntBASIC19.3■□□□□ 0.68
PRAMEF2O60811 SLC25A24-204ENST00000569674 2357 ntBASIC19.3■□□□□ 0.68
PRAMEF2O60811 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PRAMEF2O60811 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.3■□□□□ 0.68
PRAMEF2O60811 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF2O60811 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF2O60811 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.29■□□□□ 0.68
PRAMEF2O60811 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF2O60811 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.29■□□□□ 0.68
PRAMEF2O60811 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF2O60811 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.29■□□□□ 0.68
PRAMEF2O60811 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.29■□□□□ 0.68
PRAMEF2O60811 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.29■□□□□ 0.68
PRAMEF2O60811 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF2O60811 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF2O60811 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF2O60811 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.29■□□□□ 0.68
PRAMEF2O60811 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF2O60811 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PRAMEF2O60811 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF2O60811 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PRAMEF2O60811 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF2O60811 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.29■□□□□ 0.68
PRAMEF2O60811 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.29■□□□□ 0.68
PRAMEF2O60811 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.29■□□□□ 0.68
PRAMEF2O60811 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.29■□□□□ 0.68
PRAMEF2O60811 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.29■□□□□ 0.68
PRAMEF2O60811 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF2O60811 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PRAMEF2O60811 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PRAMEF2O60811 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF2O60811 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PRAMEF2O60811 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.29■□□□□ 0.68
PRAMEF2O60811 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF2O60811 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF2O60811 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF2O60811 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PRAMEF2O60811 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF2O60811 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.28■□□□□ 0.68
PRAMEF2O60811 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF2O60811 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF2O60811 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF2O60811 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.28■□□□□ 0.68
PRAMEF2O60811 AC073210.2-201ENST00000430369 194 ntBASIC19.28■□□□□ 0.68
PRAMEF2O60811 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF2O60811 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF2O60811 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PRAMEF2O60811 AC069236.1-201ENST00000604339 616 ntBASIC19.28■□□□□ 0.68
PRAMEF2O60811 OR10C1-204ENST00000622521 1039 ntBASIC19.28■□□□□ 0.68
PRAMEF2O60811 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PRAMEF2O60811 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF2O60811 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.28■□□□□ 0.68
PRAMEF2O60811 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF2O60811 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF2O60811 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PRAMEF2O60811 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF2O60811 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF2O60811 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF2O60811 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.27■□□□□ 0.68
PRAMEF2O60811 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF2O60811 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.27■□□□□ 0.68
PRAMEF2O60811 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF2O60811 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.27■□□□□ 0.68
PRAMEF2O60811 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.27■□□□□ 0.68
PRAMEF2O60811 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.27■□□□□ 0.68
PRAMEF2O60811 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.27■□□□□ 0.68
PRAMEF2O60811 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
PRAMEF2O60811 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF2O60811 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.27■□□□□ 0.68
PRAMEF2O60811 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF2O60811 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PRAMEF2O60811 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
PRAMEF2O60811 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PRAMEF2O60811 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF2O60811 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF2O60811 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PRAMEF2O60811 MKRN4P-201ENST00000444706 1521 ntBASIC19.26■□□□□ 0.67
PRAMEF2O60811 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PRAMEF2O60811 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF2O60811 MIR4758-201ENST00000577688 71 ntBASIC19.26■□□□□ 0.67
PRAMEF2O60811 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
PRAMEF2O60811 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.26■□□□□ 0.67
PRAMEF2O60811 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
PRAMEF2O60811 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.26■□□□□ 0.67
PRAMEF2O60811 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.26■□□□□ 0.67
PRAMEF2O60811 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF2O60811 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF2O60811 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF2O60811 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.26■□□□□ 0.67
PRAMEF2O60811 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PRAMEF2O60811 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF2O60811 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF2O60811 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.26■□□□□ 0.67
PRAMEF2O60811 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms