Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
DLX3O60479 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.18■□□□□ 0.82
DLX3O60479 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
DLX3O60479 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DLX3O60479 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.18■□□□□ 0.82
DLX3O60479 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
DLX3O60479 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.18■□□□□ 0.82
DLX3O60479 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.18■□□□□ 0.82
DLX3O60479 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
DLX3O60479 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DLX3O60479 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.18■□□□□ 0.82
DLX3O60479 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DLX3O60479 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DLX3O60479 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.18■□□□□ 0.82
DLX3O60479 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.18■□□□□ 0.82
DLX3O60479 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DLX3O60479 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DLX3O60479 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
DLX3O60479 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DLX3O60479 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
DLX3O60479 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.17■□□□□ 0.82
DLX3O60479 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DLX3O60479 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
DLX3O60479 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
DLX3O60479 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
DLX3O60479 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
DLX3O60479 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
DLX3O60479 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DLX3O60479 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
DLX3O60479 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DLX3O60479 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.17■□□□□ 0.82
DLX3O60479 AC138907.5-202ENST00000569484 235 ntBASIC20.17■□□□□ 0.82
DLX3O60479 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DLX3O60479 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
DLX3O60479 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.17■□□□□ 0.82
DLX3O60479 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.17■□□□□ 0.82
DLX3O60479 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DLX3O60479 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.17■□□□□ 0.82
DLX3O60479 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
DLX3O60479 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
DLX3O60479 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DLX3O60479 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
DLX3O60479 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
DLX3O60479 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.16■□□□□ 0.82
DLX3O60479 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DLX3O60479 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.16■□□□□ 0.82
DLX3O60479 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.16■□□□□ 0.82
DLX3O60479 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.16■□□□□ 0.82
DLX3O60479 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
DLX3O60479 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
DLX3O60479 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
DLX3O60479 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DLX3O60479 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.16■□□□□ 0.82
DLX3O60479 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DLX3O60479 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
DLX3O60479 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
DLX3O60479 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
DLX3O60479 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DLX3O60479 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.15■□□□□ 0.82
DLX3O60479 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.15■□□□□ 0.82
DLX3O60479 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.15■□□□□ 0.82
DLX3O60479 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DLX3O60479 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.15■□□□□ 0.82
DLX3O60479 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.15■□□□□ 0.82
DLX3O60479 AL139246.5-201ENST00000606645 996 ntBASIC20.15■□□□□ 0.82
DLX3O60479 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.15■□□□□ 0.82
DLX3O60479 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.15■□□□□ 0.82
DLX3O60479 KRT16P2-201ENST00000414673 1423 ntBASIC20.15■□□□□ 0.82
DLX3O60479 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.15■□□□□ 0.82
DLX3O60479 AC092720.2-201ENST00000602388 1665 ntBASIC20.15■□□□□ 0.82
DLX3O60479 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DLX3O60479 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DLX3O60479 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DLX3O60479 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
DLX3O60479 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
DLX3O60479 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DLX3O60479 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DLX3O60479 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DLX3O60479 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
DLX3O60479 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
DLX3O60479 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
DLX3O60479 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DLX3O60479 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DLX3O60479 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
DLX3O60479 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DLX3O60479 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
DLX3O60479 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.14■□□□□ 0.81
DLX3O60479 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DLX3O60479 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DLX3O60479 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.14■□□□□ 0.81
DLX3O60479 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DLX3O60479 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.14■□□□□ 0.81
DLX3O60479 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
DLX3O60479 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.13■□□□□ 0.81
DLX3O60479 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DLX3O60479 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
DLX3O60479 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DLX3O60479 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DLX3O60479 AC142381.2-201ENST00000566120 298 ntBASIC20.13■□□□□ 0.81
DLX3O60479 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms