Protein–RNA interactions for Protein: O60393

NOBOX, Homeobox protein NOBOX, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOBOXO60393 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
NOBOXO60393 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
NOBOXO60393 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NOBOXO60393 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NOBOXO60393 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.34■□□□□ 0.85
NOBOXO60393 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.34■□□□□ 0.85
NOBOXO60393 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NOBOXO60393 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NOBOXO60393 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.34■□□□□ 0.85
NOBOXO60393 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NOBOXO60393 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NOBOXO60393 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
NOBOXO60393 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NOBOXO60393 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
NOBOXO60393 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.33■□□□□ 0.85
NOBOXO60393 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NOBOXO60393 AC091799.1-201ENST00000422823 811 ntBASIC20.33■□□□□ 0.85
NOBOXO60393 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NOBOXO60393 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.33■□□□□ 0.85
NOBOXO60393 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NOBOXO60393 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NOBOXO60393 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NOBOXO60393 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NOBOXO60393 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
NOBOXO60393 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NOBOXO60393 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NOBOXO60393 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NOBOXO60393 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NOBOXO60393 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.32■□□□□ 0.84
NOBOXO60393 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.32■□□□□ 0.84
NOBOXO60393 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.32■□□□□ 0.84
NOBOXO60393 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.32■□□□□ 0.84
NOBOXO60393 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
NOBOXO60393 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NOBOXO60393 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NOBOXO60393 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.32■□□□□ 0.84
NOBOXO60393 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.31■□□□□ 0.84
NOBOXO60393 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NOBOXO60393 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NOBOXO60393 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
NOBOXO60393 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
NOBOXO60393 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NOBOXO60393 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NOBOXO60393 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NOBOXO60393 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.31■□□□□ 0.84
NOBOXO60393 FAM201B-201ENST00000458407 597 ntBASIC20.31■□□□□ 0.84
NOBOXO60393 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.31■□□□□ 0.84
NOBOXO60393 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.31■□□□□ 0.84
NOBOXO60393 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.31■□□□□ 0.84
NOBOXO60393 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NOBOXO60393 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NOBOXO60393 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.31■□□□□ 0.84
NOBOXO60393 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NOBOXO60393 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NOBOXO60393 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.3■□□□□ 0.84
NOBOXO60393 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NOBOXO60393 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
NOBOXO60393 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NOBOXO60393 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.3■□□□□ 0.84
NOBOXO60393 AC245052.3-201ENST00000450182 901 ntBASIC20.3■□□□□ 0.84
NOBOXO60393 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.3■□□□□ 0.84
NOBOXO60393 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.3■□□□□ 0.84
NOBOXO60393 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NOBOXO60393 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.3■□□□□ 0.84
NOBOXO60393 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
NOBOXO60393 MYC-209ENST00000641252 345 ntBASIC20.3■□□□□ 0.84
NOBOXO60393 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NOBOXO60393 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.3■□□□□ 0.84
NOBOXO60393 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
NOBOXO60393 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NOBOXO60393 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NOBOXO60393 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NOBOXO60393 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NOBOXO60393 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.3■□□□□ 0.84
NOBOXO60393 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NOBOXO60393 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NOBOXO60393 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NOBOXO60393 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NOBOXO60393 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NOBOXO60393 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
NOBOXO60393 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
NOBOXO60393 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.29■□□□□ 0.84
NOBOXO60393 AC083880.1-201ENST00000608266 535 ntBASIC20.29■□□□□ 0.84
NOBOXO60393 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NOBOXO60393 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NOBOXO60393 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NOBOXO60393 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
NOBOXO60393 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NOBOXO60393 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
NOBOXO60393 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.29■□□□□ 0.84
NOBOXO60393 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NOBOXO60393 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.29■□□□□ 0.84
NOBOXO60393 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NOBOXO60393 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NOBOXO60393 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NOBOXO60393 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.28■□□□□ 0.84
NOBOXO60393 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NOBOXO60393 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NOBOXO60393 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NOBOXO60393 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms