Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
VEGFDO43915 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VEGFDO43915 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
VEGFDO43915 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VEGFDO43915 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VEGFDO43915 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.23■□□□□ 0.83
VEGFDO43915 KRT18P68-201ENST00000392293 1000 ntBASIC20.23■□□□□ 0.83
VEGFDO43915 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VEGFDO43915 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
VEGFDO43915 AC073210.2-201ENST00000430369 194 ntBASIC20.23■□□□□ 0.83
VEGFDO43915 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.23■□□□□ 0.83
VEGFDO43915 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VEGFDO43915 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.23■□□□□ 0.83
VEGFDO43915 AC092118.2-201ENST00000613495 667 ntBASIC20.23■□□□□ 0.83
VEGFDO43915 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.23■□□□□ 0.83
VEGFDO43915 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.23■□□□□ 0.83
VEGFDO43915 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.23■□□□□ 0.83
VEGFDO43915 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
VEGFDO43915 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.23■□□□□ 0.83
VEGFDO43915 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
VEGFDO43915 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VEGFDO43915 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.22■□□□□ 0.83
VEGFDO43915 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
VEGFDO43915 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
VEGFDO43915 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
VEGFDO43915 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
VEGFDO43915 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VEGFDO43915 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
VEGFDO43915 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VEGFDO43915 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.22■□□□□ 0.83
VEGFDO43915 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VEGFDO43915 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VEGFDO43915 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.22■□□□□ 0.83
VEGFDO43915 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VEGFDO43915 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VEGFDO43915 AL138781.1-201ENST00000566567 1274 ntBASIC20.22■□□□□ 0.83
VEGFDO43915 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.22■□□□□ 0.83
VEGFDO43915 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
VEGFDO43915 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
VEGFDO43915 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.22■□□□□ 0.83
VEGFDO43915 AL589743.5-201ENST00000616611 1050 ntBASIC20.22■□□□□ 0.83
VEGFDO43915 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VEGFDO43915 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.22■□□□□ 0.83
VEGFDO43915 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
VEGFDO43915 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VEGFDO43915 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VEGFDO43915 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
VEGFDO43915 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VEGFDO43915 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VEGFDO43915 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
VEGFDO43915 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.21■□□□□ 0.83
VEGFDO43915 AC027702.1-201ENST00000563810 1770 ntBASIC20.21■□□□□ 0.83
VEGFDO43915 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.21■□□□□ 0.83
VEGFDO43915 AC087633.2-202ENST00000565166 1439 ntBASIC20.21■□□□□ 0.83
VEGFDO43915 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.21■□□□□ 0.83
VEGFDO43915 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
VEGFDO43915 LSM12P1-201ENST00000411836 588 ntBASIC20.21■□□□□ 0.83
VEGFDO43915 AL355472.2-201ENST00000422958 438 ntBASIC20.21■□□□□ 0.83
VEGFDO43915 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.21■□□□□ 0.83
VEGFDO43915 AC133041.1-202ENST00000642053 222 ntBASIC20.21■□□□□ 0.83
VEGFDO43915 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VEGFDO43915 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
VEGFDO43915 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VEGFDO43915 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VEGFDO43915 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VEGFDO43915 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VEGFDO43915 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
VEGFDO43915 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
VEGFDO43915 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VEGFDO43915 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VEGFDO43915 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
VEGFDO43915 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VEGFDO43915 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.2■□□□□ 0.82
VEGFDO43915 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
VEGFDO43915 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.2■□□□□ 0.82
VEGFDO43915 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.2■□□□□ 0.82
VEGFDO43915 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.2■□□□□ 0.82
VEGFDO43915 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.2■□□□□ 0.82
VEGFDO43915 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.2■□□□□ 0.82
VEGFDO43915 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.2■□□□□ 0.82
VEGFDO43915 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.2■□□□□ 0.82
VEGFDO43915 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
VEGFDO43915 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
VEGFDO43915 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
VEGFDO43915 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
VEGFDO43915 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
VEGFDO43915 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VEGFDO43915 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
VEGFDO43915 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.19■□□□□ 0.82
VEGFDO43915 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VEGFDO43915 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VEGFDO43915 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
VEGFDO43915 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.19■□□□□ 0.82
VEGFDO43915 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VEGFDO43915 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
VEGFDO43915 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
VEGFDO43915 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.19■□□□□ 0.82
VEGFDO43915 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.19■□□□□ 0.82
VEGFDO43915 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.19■□□□□ 0.82
VEGFDO43915 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms