Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RRP8O43159 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.4■□□□□ 0.7
RRP8O43159 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.4■□□□□ 0.7
RRP8O43159 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RRP8O43159 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RRP8O43159 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RRP8O43159 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.4■□□□□ 0.7
RRP8O43159 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RRP8O43159 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RRP8O43159 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.4■□□□□ 0.7
RRP8O43159 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RRP8O43159 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.4■□□□□ 0.7
RRP8O43159 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RRP8O43159 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RRP8O43159 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RRP8O43159 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RRP8O43159 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RRP8O43159 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RRP8O43159 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RRP8O43159 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RRP8O43159 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RRP8O43159 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.39■□□□□ 0.69
RRP8O43159 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RRP8O43159 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RRP8O43159 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.39■□□□□ 0.69
RRP8O43159 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.39■□□□□ 0.69
RRP8O43159 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.39■□□□□ 0.69
RRP8O43159 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.39■□□□□ 0.69
RRP8O43159 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.39■□□□□ 0.69
RRP8O43159 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.39■□□□□ 0.69
RRP8O43159 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
RRP8O43159 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RRP8O43159 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RRP8O43159 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RRP8O43159 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RRP8O43159 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RRP8O43159 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RRP8O43159 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RRP8O43159 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RRP8O43159 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RRP8O43159 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RRP8O43159 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.38■□□□□ 0.69
RRP8O43159 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RRP8O43159 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.38■□□□□ 0.69
RRP8O43159 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RRP8O43159 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RRP8O43159 AC105020.6-201ENST00000621523 1217 ntBASIC19.38■□□□□ 0.69
RRP8O43159 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.38■□□□□ 0.69
RRP8O43159 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RRP8O43159 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
RRP8O43159 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
RRP8O43159 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.37■□□□□ 0.69
RRP8O43159 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RRP8O43159 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RRP8O43159 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.37■□□□□ 0.69
RRP8O43159 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.37■□□□□ 0.69
RRP8O43159 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RRP8O43159 MMP23A-201ENST00000234610 1017 ntBASIC19.37■□□□□ 0.69
RRP8O43159 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RRP8O43159 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RRP8O43159 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.37■□□□□ 0.69
RRP8O43159 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.37■□□□□ 0.69
RRP8O43159 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RRP8O43159 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.37■□□□□ 0.69
RRP8O43159 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.37■□□□□ 0.69
RRP8O43159 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.37■□□□□ 0.69
RRP8O43159 AC120498.8-201ENST00000614275 531 ntBASIC19.37■□□□□ 0.69
RRP8O43159 AC092865.7-201ENST00000641832 219 ntBASIC19.37■□□□□ 0.69
RRP8O43159 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
RRP8O43159 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RRP8O43159 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RRP8O43159 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RRP8O43159 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RRP8O43159 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RRP8O43159 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RRP8O43159 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.36■□□□□ 0.69
RRP8O43159 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RRP8O43159 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RRP8O43159 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
RRP8O43159 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RRP8O43159 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RRP8O43159 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RRP8O43159 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RRP8O43159 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RRP8O43159 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.36■□□□□ 0.69
RRP8O43159 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RRP8O43159 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
RRP8O43159 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.36■□□□□ 0.69
RRP8O43159 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RRP8O43159 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RRP8O43159 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RRP8O43159 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RRP8O43159 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RRP8O43159 C9orf163-202ENST00000624034 2573 ntBASIC19.36■□□□□ 0.69
RRP8O43159 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RRP8O43159 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RRP8O43159 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
RRP8O43159 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RRP8O43159 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RRP8O43159 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms