Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 AC105020.6-201ENST00000621523 1217 ntBASIC13.74□□□□□ -0.21
RTL8CO15255 AC133561.5-201ENST00000635547 218 ntBASIC13.74□□□□□ -0.21
RTL8CO15255 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RTL8CO15255 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RTL8CO15255 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
RTL8CO15255 C1orf229-201ENST00000623686 2258 ntBASIC13.74□□□□□ -0.21
RTL8CO15255 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC13.74□□□□□ -0.21
RTL8CO15255 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
RTL8CO15255 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC13.74□□□□□ -0.21
RTL8CO15255 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTL8CO15255 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC13.73□□□□□ -0.21
RTL8CO15255 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTL8CO15255 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTL8CO15255 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTL8CO15255 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTL8CO15255 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC13.73□□□□□ -0.21
RTL8CO15255 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RTL8CO15255 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RTL8CO15255 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
RTL8CO15255 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RTL8CO15255 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RTL8CO15255 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RTL8CO15255 TSPY15P-201ENST00000457163 923 ntBASIC13.73□□□□□ -0.21
RTL8CO15255 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTL8CO15255 AL023875.1-201ENST00000640777 796 ntBASIC13.73□□□□□ -0.21
RTL8CO15255 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTL8CO15255 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RTL8CO15255 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RTL8CO15255 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC13.73□□□□□ -0.21
RTL8CO15255 CASK-201ENST00000378154 2494 ntTSL 5 BASIC13.73□□□□□ -0.21
RTL8CO15255 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC13.73□□□□□ -0.21
RTL8CO15255 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTL8CO15255 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC13.73□□□□□ -0.21
RTL8CO15255 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RTL8CO15255 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RTL8CO15255 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC13.73□□□□□ -0.21
RTL8CO15255 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RTL8CO15255 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RTL8CO15255 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTL8CO15255 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC13.72□□□□□ -0.21
RTL8CO15255 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RTL8CO15255 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTL8CO15255 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RTL8CO15255 AC092053.2-201ENST00000640557 1818 ntBASIC13.72□□□□□ -0.21
RTL8CO15255 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTL8CO15255 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTL8CO15255 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTL8CO15255 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RTL8CO15255 AC087499.1-201ENST00000418141 1075 ntBASIC13.72□□□□□ -0.21
RTL8CO15255 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RTL8CO15255 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC13.72□□□□□ -0.21
RTL8CO15255 AC133681.1-201ENST00000465482 601 ntBASIC13.72□□□□□ -0.21
RTL8CO15255 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC13.72□□□□□ -0.21
RTL8CO15255 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.72□□□□□ -0.21
RTL8CO15255 DHDH-203ENST00000522614 776 ntTSL 5 BASIC13.72□□□□□ -0.21
RTL8CO15255 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.72□□□□□ -0.21
RTL8CO15255 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.72□□□□□ -0.21
RTL8CO15255 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RTL8CO15255 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
RTL8CO15255 AP001412.1-201ENST00000608405 714 ntBASIC13.72□□□□□ -0.21
RTL8CO15255 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC13.72□□□□□ -0.21
RTL8CO15255 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC13.72□□□□□ -0.21
RTL8CO15255 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTL8CO15255 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC13.72□□□□□ -0.21
RTL8CO15255 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTL8CO15255 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTL8CO15255 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTL8CO15255 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTL8CO15255 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTL8CO15255 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RTL8CO15255 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RTL8CO15255 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RTL8CO15255 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RTL8CO15255 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RTL8CO15255 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
RTL8CO15255 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC13.71□□□□□ -0.21
RTL8CO15255 AC127496.7-201ENST00000625110 1798 ntBASIC13.71□□□□□ -0.21
RTL8CO15255 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
RTL8CO15255 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC13.71□□□□□ -0.21
RTL8CO15255 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RTL8CO15255 AC239809.2-201ENST00000415381 517 ntBASIC13.71□□□□□ -0.21
RTL8CO15255 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.71□□□□□ -0.21
RTL8CO15255 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC13.71□□□□□ -0.21
RTL8CO15255 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTL8CO15255 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.71□□□□□ -0.21
RTL8CO15255 MIR4785-201ENST00000585005 73 ntBASIC13.71□□□□□ -0.21
RTL8CO15255 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.71□□□□□ -0.21
RTL8CO15255 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTL8CO15255 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RTL8CO15255 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTL8CO15255 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC13.71□□□□□ -0.21
RTL8CO15255 PKD1P6-201ENST00000343738 4769 ntBASIC13.71□□□□□ -0.21
RTL8CO15255 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC13.71□□□□□ -0.22
RTL8CO15255 C9orf163-202ENST00000624034 2573 ntBASIC13.71□□□□□ -0.22
RTL8CO15255 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC13.71□□□□□ -0.22
RTL8CO15255 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RTL8CO15255 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RTL8CO15255 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RTL8CO15255 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
RTL8CO15255 PKM-204ENST00000449901 2526 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms