Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TSPAN4O14817 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TSPAN4O14817 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TSPAN4O14817 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
TSPAN4O14817 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TSPAN4O14817 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TSPAN4O14817 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.17■□□□□ 0.34
TSPAN4O14817 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TSPAN4O14817 AC005703.6-201ENST00000623265 1329 ntBASIC17.17■□□□□ 0.34
TSPAN4O14817 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.17■□□□□ 0.34
TSPAN4O14817 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN4O14817 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
TSPAN4O14817 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN4O14817 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN4O14817 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TSPAN4O14817 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.16■□□□□ 0.34
TSPAN4O14817 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN4O14817 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TSPAN4O14817 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN4O14817 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.16■□□□□ 0.34
TSPAN4O14817 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN4O14817 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN4O14817 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN4O14817 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.16■□□□□ 0.34
TSPAN4O14817 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.16■□□□□ 0.34
TSPAN4O14817 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.16■□□□□ 0.34
TSPAN4O14817 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN4O14817 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.16■□□□□ 0.34
TSPAN4O14817 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.16■□□□□ 0.34
TSPAN4O14817 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.16■□□□□ 0.34
TSPAN4O14817 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN4O14817 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN4O14817 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN4O14817 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN4O14817 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TSPAN4O14817 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN4O14817 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN4O14817 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN4O14817 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN4O14817 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN4O14817 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TSPAN4O14817 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN4O14817 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN4O14817 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN4O14817 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.16■□□□□ 0.34
TSPAN4O14817 Z98882.1-201ENST00000622160 2253 ntBASIC17.16■□□□□ 0.34
TSPAN4O14817 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN4O14817 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN4O14817 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.15■□□□□ 0.34
TSPAN4O14817 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN4O14817 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.15■□□□□ 0.34
TSPAN4O14817 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN4O14817 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN4O14817 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN4O14817 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN4O14817 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN4O14817 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN4O14817 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN4O14817 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN4O14817 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TSPAN4O14817 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.15■□□□□ 0.34
TSPAN4O14817 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.15■□□□□ 0.34
TSPAN4O14817 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
TSPAN4O14817 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.15■□□□□ 0.34
TSPAN4O14817 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN4O14817 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN4O14817 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
TSPAN4O14817 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TSPAN4O14817 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.14■□□□□ 0.33
TSPAN4O14817 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN4O14817 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN4O14817 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
TSPAN4O14817 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN4O14817 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TSPAN4O14817 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN4O14817 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TSPAN4O14817 AL133373.2-201ENST00000623187 2828 ntBASIC17.14■□□□□ 0.33
TSPAN4O14817 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN4O14817 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN4O14817 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN4O14817 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN4O14817 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TSPAN4O14817 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN4O14817 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN4O14817 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN4O14817 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TSPAN4O14817 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN4O14817 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN4O14817 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TSPAN4O14817 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN4O14817 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TSPAN4O14817 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.14■□□□□ 0.33
TSPAN4O14817 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
TSPAN4O14817 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TSPAN4O14817 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.13■□□□□ 0.33
TSPAN4O14817 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TSPAN4O14817 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
TSPAN4O14817 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TSPAN4O14817 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TSPAN4O14817 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms