Protein–RNA interactions for Protein: O14594

NCAN, Neurocan core protein, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCANO14594 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
NCANO14594 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NCANO14594 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.18■■□□□ 1.14
NCANO14594 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC22.18■■□□□ 1.14
NCANO14594 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.18■■□□□ 1.14
NCANO14594 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NCANO14594 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NCANO14594 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NCANO14594 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.17■■□□□ 1.14
NCANO14594 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NCANO14594 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.17■■□□□ 1.14
NCANO14594 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NCANO14594 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
NCANO14594 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.17■■□□□ 1.14
NCANO14594 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.17■■□□□ 1.14
NCANO14594 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NCANO14594 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
NCANO14594 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
NCANO14594 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NCANO14594 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NCANO14594 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NCANO14594 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
NCANO14594 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
NCANO14594 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NCANO14594 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NCANO14594 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NCANO14594 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.16■■□□□ 1.14
NCANO14594 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
NCANO14594 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.16■■□□□ 1.14
NCANO14594 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
NCANO14594 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NCANO14594 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
NCANO14594 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.16■■□□□ 1.14
NCANO14594 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
NCANO14594 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NCANO14594 KRT18P6-201ENST00000555540 1265 ntBASIC22.16■■□□□ 1.14
NCANO14594 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.16■■□□□ 1.14
NCANO14594 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
NCANO14594 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC22.16■■□□□ 1.14
NCANO14594 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.16■■□□□ 1.14
NCANO14594 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.16■■□□□ 1.14
NCANO14594 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
NCANO14594 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.16■■□□□ 1.14
NCANO14594 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NCANO14594 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.15■■□□□ 1.14
NCANO14594 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NCANO14594 AP005212.1-201ENST00000581547 1997 ntBASIC22.15■■□□□ 1.14
NCANO14594 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
NCANO14594 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
NCANO14594 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NCANO14594 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NCANO14594 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NCANO14594 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NCANO14594 AC069152.1-201ENST00000438030 544 ntBASIC22.15■■□□□ 1.14
NCANO14594 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.15■■□□□ 1.14
NCANO14594 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
NCANO14594 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
NCANO14594 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
NCANO14594 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NCANO14594 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NCANO14594 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
NCANO14594 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
NCANO14594 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
NCANO14594 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
NCANO14594 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
NCANO14594 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
NCANO14594 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
NCANO14594 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
NCANO14594 POU5F1P4-201ENST00000413175 1085 ntBASIC22.14■■□□□ 1.14
NCANO14594 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.14■■□□□ 1.14
NCANO14594 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.14■■□□□ 1.14
NCANO14594 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
NCANO14594 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
NCANO14594 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.14■■□□□ 1.14
NCANO14594 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC22.14■■□□□ 1.14
NCANO14594 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NCANO14594 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NCANO14594 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NCANO14594 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.14■■□□□ 1.13
NCANO14594 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NCANO14594 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
NCANO14594 GABARAPL3-202ENST00000624044 1851 ntBASIC22.14■■□□□ 1.13
NCANO14594 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NCANO14594 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
NCANO14594 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.13■■□□□ 1.13
NCANO14594 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
NCANO14594 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
NCANO14594 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC22.13■■□□□ 1.13
NCANO14594 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.13■■□□□ 1.13
NCANO14594 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.13■■□□□ 1.13
NCANO14594 AC008175.2-201ENST00000612840 297 ntBASIC22.13■■□□□ 1.13
NCANO14594 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NCANO14594 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
NCANO14594 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NCANO14594 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NCANO14594 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
NCANO14594 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.13■■□□□ 1.13
NCANO14594 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
NCANO14594 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NCANO14594 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms