Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
TRAFD1O14545 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAFD1O14545 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAFD1O14545 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRAFD1O14545 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAFD1O14545 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAFD1O14545 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.06■□□□□ 0.96
TRAFD1O14545 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.06■□□□□ 0.96
TRAFD1O14545 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.06■□□□□ 0.96
TRAFD1O14545 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRAFD1O14545 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
TRAFD1O14545 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.06■□□□□ 0.96
TRAFD1O14545 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAFD1O14545 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.06■□□□□ 0.96
TRAFD1O14545 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAFD1O14545 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRAFD1O14545 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRAFD1O14545 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAFD1O14545 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.05■□□□□ 0.96
TRAFD1O14545 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAFD1O14545 RBM17P2-201ENST00000616397 1405 ntBASIC21.05■□□□□ 0.96
TRAFD1O14545 CNN2P6-201ENST00000439038 900 ntBASIC21.05■□□□□ 0.96
TRAFD1O14545 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
TRAFD1O14545 TERF1P5-201ENST00000477545 1207 ntBASIC21.05■□□□□ 0.96
TRAFD1O14545 AC243732.1-201ENST00000612648 864 ntBASIC21.05■□□□□ 0.96
TRAFD1O14545 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.05■□□□□ 0.96
TRAFD1O14545 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.05■□□□□ 0.96
TRAFD1O14545 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
TRAFD1O14545 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.05■□□□□ 0.96
TRAFD1O14545 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAFD1O14545 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAFD1O14545 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAFD1O14545 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
TRAFD1O14545 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.04■□□□□ 0.96
TRAFD1O14545 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAFD1O14545 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.04■□□□□ 0.96
TRAFD1O14545 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAFD1O14545 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRAFD1O14545 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAFD1O14545 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAFD1O14545 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAFD1O14545 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAFD1O14545 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAFD1O14545 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.04■□□□□ 0.96
TRAFD1O14545 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.04■□□□□ 0.96
TRAFD1O14545 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.04■□□□□ 0.96
TRAFD1O14545 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.04■□□□□ 0.96
TRAFD1O14545 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAFD1O14545 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAFD1O14545 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAFD1O14545 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
TRAFD1O14545 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.04■□□□□ 0.96
TRAFD1O14545 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.04■□□□□ 0.96
TRAFD1O14545 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAFD1O14545 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAFD1O14545 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.03■□□□□ 0.96
TRAFD1O14545 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
TRAFD1O14545 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.03■□□□□ 0.96
TRAFD1O14545 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAFD1O14545 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAFD1O14545 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAFD1O14545 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.03■□□□□ 0.96
TRAFD1O14545 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
TRAFD1O14545 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.03■□□□□ 0.96
TRAFD1O14545 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRAFD1O14545 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAFD1O14545 FEM1AP1-201ENST00000431297 1995 ntBASIC21.03■□□□□ 0.96
TRAFD1O14545 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAFD1O14545 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.03■□□□□ 0.96
TRAFD1O14545 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAFD1O14545 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAFD1O14545 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.02■□□□□ 0.96
TRAFD1O14545 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAFD1O14545 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAFD1O14545 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.02■□□□□ 0.96
TRAFD1O14545 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.02■□□□□ 0.96
TRAFD1O14545 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.02■□□□□ 0.96
TRAFD1O14545 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRAFD1O14545 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.02■□□□□ 0.96
TRAFD1O14545 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.02■□□□□ 0.96
TRAFD1O14545 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.02■□□□□ 0.96
TRAFD1O14545 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
TRAFD1O14545 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAFD1O14545 AC231657.2-201ENST00000624556 255 ntBASIC21.02■□□□□ 0.96
TRAFD1O14545 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAFD1O14545 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAFD1O14545 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAFD1O14545 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
TRAFD1O14545 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRAFD1O14545 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAFD1O14545 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.01■□□□□ 0.95
TRAFD1O14545 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.01■□□□□ 0.95
TRAFD1O14545 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAFD1O14545 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.01■□□□□ 0.95
TRAFD1O14545 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAFD1O14545 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
TRAFD1O14545 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.01■□□□□ 0.95
TRAFD1O14545 AC007322.4-201ENST00000509611 723 ntBASIC21.01■□□□□ 0.95
TRAFD1O14545 AC090192.1-201ENST00000517740 490 ntBASIC21.01■□□□□ 0.95
TRAFD1O14545 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms