Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPA3F8WFD2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPA3F8WFD2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NPIPA3F8WFD2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.74■□□□□ 0.59
NPIPA3F8WFD2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NPIPA3F8WFD2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.74■□□□□ 0.59
NPIPA3F8WFD2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NPIPA3F8WFD2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPA3F8WFD2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
NPIPA3F8WFD2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPA3F8WFD2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
NPIPA3F8WFD2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPA3F8WFD2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NPIPA3F8WFD2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPA3F8WFD2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPA3F8WFD2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPA3F8WFD2 AC097658.1-201ENST00000475555 843 ntBASIC18.73■□□□□ 0.59
NPIPA3F8WFD2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.73■□□□□ 0.59
NPIPA3F8WFD2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.73■□□□□ 0.59
NPIPA3F8WFD2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.73■□□□□ 0.59
NPIPA3F8WFD2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPA3F8WFD2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPA3F8WFD2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NPIPA3F8WFD2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPA3F8WFD2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPA3F8WFD2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPA3F8WFD2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.73■□□□□ 0.59
NPIPA3F8WFD2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPA3F8WFD2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPA3F8WFD2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NPIPA3F8WFD2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPA3F8WFD2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NPIPA3F8WFD2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.72■□□□□ 0.59
NPIPA3F8WFD2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPA3F8WFD2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.72■□□□□ 0.59
NPIPA3F8WFD2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.72■□□□□ 0.59
NPIPA3F8WFD2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NPIPA3F8WFD2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPA3F8WFD2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPA3F8WFD2 AC091799.1-201ENST00000422823 811 ntBASIC18.72■□□□□ 0.59
NPIPA3F8WFD2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NPIPA3F8WFD2 CDV3P1-201ENST00000471403 739 ntBASIC18.72■□□□□ 0.59
NPIPA3F8WFD2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.72■□□□□ 0.59
NPIPA3F8WFD2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.72■□□□□ 0.59
NPIPA3F8WFD2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.72■□□□□ 0.59
NPIPA3F8WFD2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.72■□□□□ 0.59
NPIPA3F8WFD2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPA3F8WFD2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPA3F8WFD2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPA3F8WFD2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.72■□□□□ 0.59
NPIPA3F8WFD2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NPIPA3F8WFD2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPA3F8WFD2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
NPIPA3F8WFD2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPA3F8WFD2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPA3F8WFD2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
NPIPA3F8WFD2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
NPIPA3F8WFD2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPA3F8WFD2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPA3F8WFD2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPA3F8WFD2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
NPIPA3F8WFD2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
NPIPA3F8WFD2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.71■□□□□ 0.59
NPIPA3F8WFD2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.71■□□□□ 0.59
NPIPA3F8WFD2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPA3F8WFD2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.71■□□□□ 0.59
NPIPA3F8WFD2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
NPIPA3F8WFD2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NPIPA3F8WFD2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPIPA3F8WFD2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
NPIPA3F8WFD2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NPIPA3F8WFD2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NPIPA3F8WFD2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.7■□□□□ 0.58
NPIPA3F8WFD2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
NPIPA3F8WFD2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPIPA3F8WFD2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NPIPA3F8WFD2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.7■□□□□ 0.58
NPIPA3F8WFD2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
NPIPA3F8WFD2 LSM12P1-201ENST00000411836 588 ntBASIC18.7■□□□□ 0.58
NPIPA3F8WFD2 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.7■□□□□ 0.58
NPIPA3F8WFD2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.7■□□□□ 0.58
NPIPA3F8WFD2 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.7■□□□□ 0.58
NPIPA3F8WFD2 DUSP5P2-201ENST00000426873 1033 ntBASIC18.7■□□□□ 0.58
NPIPA3F8WFD2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NPIPA3F8WFD2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPIPA3F8WFD2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.7■□□□□ 0.58
NPIPA3F8WFD2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPIPA3F8WFD2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.7■□□□□ 0.58
NPIPA3F8WFD2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
NPIPA3F8WFD2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.7■□□□□ 0.58
NPIPA3F8WFD2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPIPA3F8WFD2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPIPA3F8WFD2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.69■□□□□ 0.58
NPIPA3F8WFD2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NPIPA3F8WFD2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPA3F8WFD2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPA3F8WFD2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPA3F8WFD2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPA3F8WFD2 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.69■□□□□ 0.58
NPIPA3F8WFD2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms