Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.5■■□□□ 1.03
YJEFN3A6XGL0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
YJEFN3A6XGL0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.5■■□□□ 1.03
YJEFN3A6XGL0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
YJEFN3A6XGL0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.5■■□□□ 1.03
YJEFN3A6XGL0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
YJEFN3A6XGL0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
YJEFN3A6XGL0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.5■■□□□ 1.03
YJEFN3A6XGL0 AL355802.2-201ENST00000402069 882 ntBASIC21.5■■□□□ 1.03
YJEFN3A6XGL0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.5■■□□□ 1.03
YJEFN3A6XGL0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.5■■□□□ 1.03
YJEFN3A6XGL0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.5■■□□□ 1.03
YJEFN3A6XGL0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
YJEFN3A6XGL0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
YJEFN3A6XGL0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
YJEFN3A6XGL0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.5■■□□□ 1.03
YJEFN3A6XGL0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
YJEFN3A6XGL0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
YJEFN3A6XGL0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
YJEFN3A6XGL0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
YJEFN3A6XGL0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
YJEFN3A6XGL0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.5■■□□□ 1.03
YJEFN3A6XGL0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
YJEFN3A6XGL0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.49■■□□□ 1.03
YJEFN3A6XGL0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
YJEFN3A6XGL0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
YJEFN3A6XGL0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
YJEFN3A6XGL0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
YJEFN3A6XGL0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
YJEFN3A6XGL0 MCRIP2P1-201ENST00000394346 511 ntBASIC21.49■■□□□ 1.03
YJEFN3A6XGL0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
YJEFN3A6XGL0 BX276092.2-201ENST00000417668 665 ntBASIC21.49■■□□□ 1.03
YJEFN3A6XGL0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.49■■□□□ 1.03
YJEFN3A6XGL0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.49■■□□□ 1.03
YJEFN3A6XGL0 AC142086.2-201ENST00000569753 217 ntBASIC21.49■■□□□ 1.03
YJEFN3A6XGL0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.49■■□□□ 1.03
YJEFN3A6XGL0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.49■■□□□ 1.03
YJEFN3A6XGL0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.49■■□□□ 1.03
YJEFN3A6XGL0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.49■■□□□ 1.03
YJEFN3A6XGL0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
YJEFN3A6XGL0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
YJEFN3A6XGL0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
YJEFN3A6XGL0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.49■■□□□ 1.03
YJEFN3A6XGL0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
YJEFN3A6XGL0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
YJEFN3A6XGL0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
YJEFN3A6XGL0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
YJEFN3A6XGL0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
YJEFN3A6XGL0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
YJEFN3A6XGL0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.48■■□□□ 1.03
YJEFN3A6XGL0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
YJEFN3A6XGL0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
YJEFN3A6XGL0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
YJEFN3A6XGL0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
YJEFN3A6XGL0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
YJEFN3A6XGL0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.48■■□□□ 1.03
YJEFN3A6XGL0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.48■■□□□ 1.03
YJEFN3A6XGL0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.48■■□□□ 1.03
YJEFN3A6XGL0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.48■■□□□ 1.03
YJEFN3A6XGL0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.48■■□□□ 1.03
YJEFN3A6XGL0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.48■■□□□ 1.03
YJEFN3A6XGL0 CYP2T3P-201ENST00000601990 817 ntBASIC21.48■■□□□ 1.03
YJEFN3A6XGL0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
YJEFN3A6XGL0 AC027702.1-201ENST00000563810 1770 ntBASIC21.48■■□□□ 1.03
YJEFN3A6XGL0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
YJEFN3A6XGL0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
YJEFN3A6XGL0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
YJEFN3A6XGL0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
YJEFN3A6XGL0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
YJEFN3A6XGL0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.47■■□□□ 1.03
YJEFN3A6XGL0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.47■■□□□ 1.03
YJEFN3A6XGL0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
YJEFN3A6XGL0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
YJEFN3A6XGL0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.47■■□□□ 1.03
YJEFN3A6XGL0 KRT17P1-201ENST00000399211 1546 ntBASIC21.47■■□□□ 1.03
YJEFN3A6XGL0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
YJEFN3A6XGL0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
YJEFN3A6XGL0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
YJEFN3A6XGL0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.47■■□□□ 1.03
YJEFN3A6XGL0 AC098934.4-201ENST00000564127 592 ntBASIC21.47■■□□□ 1.03
YJEFN3A6XGL0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
YJEFN3A6XGL0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
YJEFN3A6XGL0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.47■■□□□ 1.03
YJEFN3A6XGL0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
YJEFN3A6XGL0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.47■■□□□ 1.03
YJEFN3A6XGL0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
YJEFN3A6XGL0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
YJEFN3A6XGL0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
YJEFN3A6XGL0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
YJEFN3A6XGL0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
YJEFN3A6XGL0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
YJEFN3A6XGL0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
YJEFN3A6XGL0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.46■■□□□ 1.03
YJEFN3A6XGL0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.46■■□□□ 1.03
YJEFN3A6XGL0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.46■■□□□ 1.03
YJEFN3A6XGL0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.46■■□□□ 1.03
YJEFN3A6XGL0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.46■■□□□ 1.03
YJEFN3A6XGL0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.46■■□□□ 1.03
YJEFN3A6XGL0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
YJEFN3A6XGL0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms