Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV5-5A0A0J9YX44 MIR572-201ENST00000384983 95 ntBASIC17.86■□□□□ 0.45
TRBV5-5A0A0J9YX44 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRBV5-5A0A0J9YX44 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.86■□□□□ 0.45
TRBV5-5A0A0J9YX44 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.86■□□□□ 0.45
TRBV5-5A0A0J9YX44 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.86■□□□□ 0.45
TRBV5-5A0A0J9YX44 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.86■□□□□ 0.45
TRBV5-5A0A0J9YX44 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.86■□□□□ 0.45
TRBV5-5A0A0J9YX44 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV5-5A0A0J9YX44 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV5-5A0A0J9YX44 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV5-5A0A0J9YX44 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV5-5A0A0J9YX44 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV5-5A0A0J9YX44 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV5-5A0A0J9YX44 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV5-5A0A0J9YX44 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV5-5A0A0J9YX44 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV5-5A0A0J9YX44 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
TRBV5-5A0A0J9YX44 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV5-5A0A0J9YX44 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV5-5A0A0J9YX44 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV5-5A0A0J9YX44 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV5-5A0A0J9YX44 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV5-5A0A0J9YX44 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV5-5A0A0J9YX44 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.85■□□□□ 0.45
TRBV5-5A0A0J9YX44 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.85■□□□□ 0.45
TRBV5-5A0A0J9YX44 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TRBV5-5A0A0J9YX44 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.85■□□□□ 0.45
TRBV5-5A0A0J9YX44 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.85■□□□□ 0.45
TRBV5-5A0A0J9YX44 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.85■□□□□ 0.45
TRBV5-5A0A0J9YX44 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV5-5A0A0J9YX44 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV5-5A0A0J9YX44 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV5-5A0A0J9YX44 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV5-5A0A0J9YX44 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.84■□□□□ 0.45
TRBV5-5A0A0J9YX44 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.84■□□□□ 0.45
TRBV5-5A0A0J9YX44 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV5-5A0A0J9YX44 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV5-5A0A0J9YX44 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV5-5A0A0J9YX44 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.84■□□□□ 0.45
TRBV5-5A0A0J9YX44 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV5-5A0A0J9YX44 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.84■□□□□ 0.45
TRBV5-5A0A0J9YX44 AC027682.1-201ENST00000562846 899 ntBASIC17.84■□□□□ 0.45
TRBV5-5A0A0J9YX44 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.84■□□□□ 0.45
TRBV5-5A0A0J9YX44 RARRES2P11-201ENST00000635158 484 ntBASIC17.84■□□□□ 0.45
TRBV5-5A0A0J9YX44 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV5-5A0A0J9YX44 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRBV5-5A0A0J9YX44 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV5-5A0A0J9YX44 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV5-5A0A0J9YX44 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV5-5A0A0J9YX44 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV5-5A0A0J9YX44 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRBV5-5A0A0J9YX44 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV5-5A0A0J9YX44 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
TRBV5-5A0A0J9YX44 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV5-5A0A0J9YX44 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.83■□□□□ 0.45
TRBV5-5A0A0J9YX44 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.83■□□□□ 0.45
TRBV5-5A0A0J9YX44 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRBV5-5A0A0J9YX44 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TRBV5-5A0A0J9YX44 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRBV5-5A0A0J9YX44 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRBV5-5A0A0J9YX44 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRBV5-5A0A0J9YX44 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
TRBV5-5A0A0J9YX44 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRBV5-5A0A0J9YX44 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.83■□□□□ 0.45
TRBV5-5A0A0J9YX44 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRBV5-5A0A0J9YX44 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.83■□□□□ 0.45
TRBV5-5A0A0J9YX44 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.83■□□□□ 0.45
TRBV5-5A0A0J9YX44 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV5-5A0A0J9YX44 POU5F1P4-201ENST00000413175 1085 ntBASIC17.83■□□□□ 0.44
TRBV5-5A0A0J9YX44 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.83■□□□□ 0.44
TRBV5-5A0A0J9YX44 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV5-5A0A0J9YX44 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.83■□□□□ 0.44
TRBV5-5A0A0J9YX44 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.44
TRBV5-5A0A0J9YX44 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TRBV5-5A0A0J9YX44 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV5-5A0A0J9YX44 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
TRBV5-5A0A0J9YX44 SMG8-203ENST00000578922 2178 ntBASIC17.83■□□□□ 0.44
TRBV5-5A0A0J9YX44 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV5-5A0A0J9YX44 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV5-5A0A0J9YX44 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
TRBV5-5A0A0J9YX44 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.82■□□□□ 0.44
TRBV5-5A0A0J9YX44 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRBV5-5A0A0J9YX44 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRBV5-5A0A0J9YX44 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV5-5A0A0J9YX44 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV5-5A0A0J9YX44 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
TRBV5-5A0A0J9YX44 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.82■□□□□ 0.44
TRBV5-5A0A0J9YX44 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV5-5A0A0J9YX44 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.82■□□□□ 0.44
TRBV5-5A0A0J9YX44 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.82■□□□□ 0.44
TRBV5-5A0A0J9YX44 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV5-5A0A0J9YX44 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRBV5-5A0A0J9YX44 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.82■□□□□ 0.44
TRBV5-5A0A0J9YX44 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.82■□□□□ 0.44
TRBV5-5A0A0J9YX44 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV5-5A0A0J9YX44 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
TRBV5-5A0A0J9YX44 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV5-5A0A0J9YX44 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.82■□□□□ 0.44
TRBV5-5A0A0J9YX44 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms