Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	PIN4	YBL051C	2007 nt		4.04	□□□□□ -1.76
TY4B-P	A0A0B7P3V8	BEM4	YPL161C	1902 nt		4.03	□□□□□ -1.76
TY4B-P	A0A0B7P3V8	CPA2	YJR109C	3357 nt		4.03	□□□□□ -1.76
TY4B-P	A0A0B7P3V8	YDR464C-A	YDR464C-A	189 nt		4.03	□□□□□ -1.76
TY4B-P	A0A0B7P3V8	RPS21B	YJL136C	264 nt		4.03	□□□□□ -1.76
TY4B-P	A0A0B7P3V8	PSY1	YKL076C	384 nt		4.03	□□□□□ -1.76
TY4B-P	A0A0B7P3V8	MRP8	YKL142W	660 nt		4.03	□□□□□ -1.76
TY4B-P	A0A0B7P3V8	RDN5-1	RDN5-1	121 nt		4.03	□□□□□ -1.76
TY4B-P	A0A0B7P3V8	RDN5-6	RDN5-6	121 nt		4.03	□□□□□ -1.76
TY4B-P	A0A0B7P3V8	YNL057W	YNL057W	333 nt		4.03	□□□□□ -1.76
TY4B-P	A0A0B7P3V8	YOL085W-A	YOL085W-A	213 nt		4.03	□□□□□ -1.76
TY4B-P	A0A0B7P3V8	YPL080C	YPL080C	327 nt		4.03	□□□□□ -1.76
TY4B-P	A0A0B7P3V8	RKM1	YPL208W	1752 nt		4.03	□□□□□ -1.76
TY4B-P	A0A0B7P3V8	PHM7	YOL084W	2976 nt		4.03	□□□□□ -1.76
TY4B-P	A0A0B7P3V8	MIP6	YHR015W	1980 nt		4.03	□□□□□ -1.76
TY4B-P	A0A0B7P3V8	FLO8	YER109C	2400 nt		4.03	□□□□□ -1.76
TY4B-P	A0A0B7P3V8	KIN82	YCR091W	2163 nt		4.03	□□□□□ -1.76
TY4B-P	A0A0B7P3V8	LCB4	YOR171C	1875 nt		4.03	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	EMP70	YLR083C	2004 nt		4.02	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	FRE4	YNR060W	2160 nt		4.02	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	RPS29B	YDL061C	171 nt		4.02	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	YFH1	YDL120W	525 nt		4.02	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	YEL075C	YEL075C	369 nt		4.02	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	TAR1	YLR154W-C	375 nt		4.02	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	YPL278C	YPL278C	303 nt		4.02	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	SNX41	YDR425W	1878 nt		4.02	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	YKL222C	YKL222C	2118 nt		4.01	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	RAD26	YJR035W	3258 nt		4.01	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	SSH1	YBR283C	1473 nt		4.01	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	GAC1	YOR178C	2382 nt		4.01	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	FRQ1	YDR373W	573 nt		4.01	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	YEL018C-A	YEL018C-A	534 nt		4.01	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	YEL020C-B	YEL020C-B	198 nt		4.01	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	CDC26	YFR036W	375 nt		4.01	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	BAT1	YHR208W	1182 nt		4.01	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	URM1	YIL008W	300 nt		4.01	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	PAU14	YIL176C	363 nt		4.01	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	PAU1	YJL223C	363 nt		4.01	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	MSH4	YFL003C	2637 nt		4.01	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	YJL016W	YJL016W	1686 nt		4	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	GSC2	YGR032W	5688 nt		4	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	YBR259W	YBR259W	2067 nt		4	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	SPT4	YGR063C	309 nt		4	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	YAR070C	YAR070C	300 nt		4	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	snR48	snR48	113 nt		4	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	PCF11	YDR228C	1881 nt		4	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	EBS1	YDR206W	2655 nt		3.99	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	ATP22	YDR350C	2055 nt		3.99	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	YDL185C-A	YDL185C-A	228 nt		3.99	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	LSM2	YBL026W	288 nt		3.99	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	FAS2	YPL231W	5664 nt		3.99	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	CHD1	YER164W	4407 nt		3.99	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	YDR089W	YDR089W	2610 nt		3.99	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	CCM1	YGR150C	2595 nt		3.99	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	PBS2	YJL128C	2007 nt		3.99	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	LYP1	YNL268W	1836 nt		3.98	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	RPN2	YIL075C	2838 nt		3.98	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	HTA1	YDR225W	399 nt		3.98	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	YER091C-A	YER091C-A	222 nt		3.98	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	COX18	YGR062C	951 nt		3.98	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	PXR1	YGR280C	816 nt		3.98	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	BCD1	YHR040W	1101 nt		3.98	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	RPC10	YHR143W-A	213 nt		3.98	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	YKL111C	YKL111C	336 nt		3.98	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	YAL059C-A	YAL059C-A	423 nt		3.98	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	YLR342W-A	YLR342W-A	174 nt		3.98	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	AIP1	YMR092C	1848 nt		3.98	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	OSW7	YFR039C	1533 nt		3.97	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	FUS1	YCL027W	1539 nt		3.97	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	KAP95	YLR347C	2586 nt		3.97	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	YDL062W	YDL062W	426 nt		3.97	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	ADK1	YDR226W	669 nt		3.97	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	RPS26B	YER131W	360 nt		3.97	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	YER188C-A	YER188C-A	300 nt		3.97	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	ALG13	YGL047W	609 nt		3.97	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	RPL37A	YLR185W	267 nt		3.97	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	COA4	YLR218C	453 nt		3.97	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	LTP1	YPR073C	486 nt		3.97	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	VPS52	YDR484W	1926 nt		3.97	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	PEX1	YKL197C	3132 nt		3.97	□□□□□ -1.77
TY4B-P	A0A0B7P3V8	HTL1	YCR020W-B	237 nt		3.96	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	RPL29	YFR032C-A	180 nt		3.96	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	RPL14A	YKL006W	417 nt		3.96	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	RPL26A	YLR344W	384 nt		3.96	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	TVP18	YMR071C	504 nt		3.96	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	RPB11	YOL005C	363 nt		3.96	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	PEX11	YOL147C	711 nt		3.96	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	MLH2	YLR035C	2088 nt		3.96	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	NUP159	YIL115C	4383 nt		3.95	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	SSP1	YHR184W	1716 nt		3.95	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	ARG2	YJL071W	1725 nt		3.95	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	SRP68	YPL243W	1800 nt		3.95	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	RAD61	YDR014W	1944 nt		3.95	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	RPL35A	YDL191W	363 nt		3.95	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	RPL40A	YIL148W	387 nt		3.95	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	GPI14	YJR013W	1212 nt		3.95	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	ALG8	YOR067C	1734 nt		3.95	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	PRK1	YIL095W	2433 nt		3.94	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	SPP382	YLR424W	2127 nt		3.94	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	YJL150W	YJL150W	303 nt		3.94	□□□□□ -1.78

Retrieved 100 of 7,029 protein–RNA pairs in 67.4 ms