Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAV5A0A0B4J249 AC126544.1-201ENST00000580842 1059 ntBASIC15.96■□□□□ 0.15
TRAV5A0A0B4J249 MIR4767-201ENST00000582827 78 ntBASIC15.96■□□□□ 0.15
TRAV5A0A0B4J249 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAV5A0A0B4J249 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV5A0A0B4J249 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TRAV5A0A0B4J249 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TRAV5A0A0B4J249 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TRAV5A0A0B4J249 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV5A0A0B4J249 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV5A0A0B4J249 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV5A0A0B4J249 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV5A0A0B4J249 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV5A0A0B4J249 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV5A0A0B4J249 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV5A0A0B4J249 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TRAV5A0A0B4J249 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV5A0A0B4J249 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV5A0A0B4J249 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV5A0A0B4J249 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV5A0A0B4J249 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV5A0A0B4J249 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV5A0A0B4J249 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRAV5A0A0B4J249 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV5A0A0B4J249 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TRAV5A0A0B4J249 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV5A0A0B4J249 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV5A0A0B4J249 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV5A0A0B4J249 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV5A0A0B4J249 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRAV5A0A0B4J249 EXOC3-AS1-202ENST00000623673 1663 ntBASIC15.95■□□□□ 0.14
TRAV5A0A0B4J249 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRAV5A0A0B4J249 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV5A0A0B4J249 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TRAV5A0A0B4J249 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 RNF146-206ENST00000480444 843 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 AC233992.3-201ENST00000607491 485 ntBASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 AC005224.4-201ENST00000583262 1652 ntBASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 AC087289.5-201ENST00000586076 3175 ntBASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV5A0A0B4J249 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV5A0A0B4J249 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV5A0A0B4J249 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV5A0A0B4J249 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV5A0A0B4J249 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV5A0A0B4J249 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV5A0A0B4J249 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TRAV5A0A0B4J249 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
TRAV5A0A0B4J249 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV5A0A0B4J249 FXN-202ENST00000396364 980 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV5A0A0B4J249 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV5A0A0B4J249 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV5A0A0B4J249 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV5A0A0B4J249 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TRAV5A0A0B4J249 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV5A0A0B4J249 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV5A0A0B4J249 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC15.93■□□□□ 0.14
TRAV5A0A0B4J249 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TRAV5A0A0B4J249 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
TRAV5A0A0B4J249 AC011484.1-201ENST00000377652 1995 ntBASIC15.93■□□□□ 0.14
TRAV5A0A0B4J249 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 UNC93B3-201ENST00000308076 687 ntBASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms