Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRAV8-2A0A0B4J237 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-2A0A0B4J237 AC011484.1-201ENST00000377652 1995 ntBASIC15.6■□□□□ 0.09
TRAV8-2A0A0B4J237 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-2A0A0B4J237 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV8-2A0A0B4J237 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-2A0A0B4J237 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRAV8-2A0A0B4J237 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-2A0A0B4J237 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-2A0A0B4J237 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-2A0A0B4J237 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-2A0A0B4J237 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-2A0A0B4J237 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-2A0A0B4J237 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRAV8-2A0A0B4J237 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-2A0A0B4J237 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-2A0A0B4J237 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-2A0A0B4J237 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV8-2A0A0B4J237 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TRAV8-2A0A0B4J237 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRAV8-2A0A0B4J237 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-2A0A0B4J237 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRAV8-2A0A0B4J237 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV8-2A0A0B4J237 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV8-2A0A0B4J237 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-2A0A0B4J237 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRAV8-2A0A0B4J237 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRAV8-2A0A0B4J237 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-2A0A0B4J237 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-2A0A0B4J237 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV8-2A0A0B4J237 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-2A0A0B4J237 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-2A0A0B4J237 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC15.59■□□□□ 0.09
TRAV8-2A0A0B4J237 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.59■□□□□ 0.09
TRAV8-2A0A0B4J237 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-2A0A0B4J237 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-2A0A0B4J237 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV8-2A0A0B4J237 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-2A0A0B4J237 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-2A0A0B4J237 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV8-2A0A0B4J237 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-2A0A0B4J237 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV8-2A0A0B4J237 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV8-2A0A0B4J237 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC15.59■□□□□ 0.09
TRAV8-2A0A0B4J237 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV8-2A0A0B4J237 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV8-2A0A0B4J237 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TRAV8-2A0A0B4J237 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-2A0A0B4J237 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-2A0A0B4J237 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-2A0A0B4J237 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV8-2A0A0B4J237 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV8-2A0A0B4J237 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV8-2A0A0B4J237 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.58■□□□□ 0.09
TRAV8-2A0A0B4J237 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV8-2A0A0B4J237 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV8-2A0A0B4J237 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-2A0A0B4J237 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TRAV8-2A0A0B4J237 MIR638-201ENST00000385237 100 ntBASIC15.58■□□□□ 0.08
TRAV8-2A0A0B4J237 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-2A0A0B4J237 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC15.58■□□□□ 0.08
TRAV8-2A0A0B4J237 AC138907.5-202ENST00000569484 235 ntBASIC15.58■□□□□ 0.08
TRAV8-2A0A0B4J237 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-2A0A0B4J237 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-2A0A0B4J237 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-2A0A0B4J237 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-2A0A0B4J237 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV8-2A0A0B4J237 FP700111.2-201ENST00000619190 1892 ntBASIC15.58■□□□□ 0.08
TRAV8-2A0A0B4J237 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-2A0A0B4J237 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV8-2A0A0B4J237 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
TRAV8-2A0A0B4J237 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV8-2A0A0B4J237 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV8-2A0A0B4J237 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-2A0A0B4J237 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRAV8-2A0A0B4J237 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 RARRES2P11-201ENST00000635158 484 ntBASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 LINC02228-203ENST00000641970 1355 ntBASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms