Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TRIM16L-201ENST00000395671 1982 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
P04436 TRIM16-211ENST00000577886 1979 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
P04436 CDH23-203ENST00000398788 4329 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
P04436 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC8.53□□□□□ -1.04
P04436 P2RY10-204ENST00000544091 1597 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
P04436 MGAM2-203ENST00000550469 1591 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
P04436 LIN52-205ENST00000555028 2776 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
P04436 MAP4-205ENST00000420772 3478 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
P04436 BRCA1-219ENST00000491747 2379 ntTSL 5 BASIC8.53□□□□□ -1.04
P04436 TTC31-202ENST00000410003 3358 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
P04436 MAT2A-201ENST00000306434 2819 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
P04436 S100A13-201ENST00000339556 514 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
P04436 GHRH-203ENST00000373614 570 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
P04436 IGLV3-25-201ENST00000390305 380 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
P04436 TRGV1-201ENST00000390348 465 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
P04436 TRAV8-6-201ENST00000390443 561 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
P04436 PRH2-202ENST00000396400 673 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
P04436 MAPRE3-202ENST00000402218 1001 ntTSL 5 BASIC8.53□□□□□ -1.04
P04436 TYROBP-202ENST00000424586 541 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
P04436 LINC01655-201ENST00000431729 423 ntTSL 3 BASIC8.53□□□□□ -1.04
P04436 AC012363.2-201ENST00000437837 555 ntTSL 4 BASIC8.53□□□□□ -1.04
P04436 AL355537.1-201ENST00000446589 450 ntTSL 2 BASIC8.53□□□□□ -1.04
P04436 AC005020.1-201ENST00000455459 526 ntBASIC8.53□□□□□ -1.04
P04436 ACPP-203ENST00000475741 1242 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
P04436 RIIAD1-206ENST00000479191 449 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
P04436 RPL29P22-201ENST00000498718 459 ntBASIC8.53□□□□□ -1.04
P04436 AC008840.1-201ENST00000512486 809 ntTSL 5 BASIC8.53□□□□□ -1.04
P04436 AP000879.1-201ENST00000526174 976 ntTSL 5 BASIC8.53□□□□□ -1.04
P04436 AP003064.2-201ENST00000528983 510 ntTSL 3 BASIC8.53□□□□□ -1.04
P04436 PRR13-210ENST00000551003 1009 ntAPPRIS ALT2 TSL 3 BASIC8.53□□□□□ -1.04
P04436 DIO2-211ENST00000557125 517 ntTSL 3 BASIC8.53□□□□□ -1.04
P04436 AC009075.1-201ENST00000563347 391 ntTSL 3 BASIC8.53□□□□□ -1.04
P04436 AC120045.1-202ENST00000567770 1068 ntBASIC8.53□□□□□ -1.04
P04436 NDUFA3P6-201ENST00000571486 250 ntBASIC8.53□□□□□ -1.04
P04436 MIR3125-201ENST00000579927 78 ntBASIC8.53□□□□□ -1.04
P04436 MIR3918-201ENST00000581555 93 ntBASIC8.53□□□□□ -1.04
P04436 AC106037.1-201ENST00000584148 336 ntTSL 5 BASIC8.53□□□□□ -1.04
P04436 OR7A3P-201ENST00000595284 907 ntBASIC8.53□□□□□ -1.04
P04436 AC010615.2-204ENST00000600469 830 ntTSL 3 BASIC8.53□□□□□ -1.04
P04436 AC055822.1-201ENST00000606067 445 ntBASIC8.53□□□□□ -1.04
P04436 DMD-209ENST00000378702 2617 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
P04436 MTBP-201ENST00000305949 3059 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
P04436 RFT1-201ENST00000296292 5108 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
P04436 ZNF418-201ENST00000396147 3694 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
P04436 KDM2A-212ENST00000530342 3651 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
P04436 LINC01120-201ENST00000437751 1861 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
P04436 FGFR2-209ENST00000369056 2650 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
P04436 AL008638.6-201ENST00000623947 4254 ntBASIC8.53□□□□□ -1.04
P04436 AL356019.2-201ENST00000556738 3829 ntBASIC8.53□□□□□ -1.04
P04436 ZNF226-202ENST00000337433 2565 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
P04436 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
P04436 ABHD18-201ENST00000388795 5450 ntTSL 5 BASIC8.53□□□□□ -1.04
P04436 HBS1L-204ENST00000367826 2703 ntTSL 2 BASIC8.52□□□□□ -1.04
P04436 CAPN11-201ENST00000398776 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
P04436 GIMAP5-201ENST00000358647 2291 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
P04436 TTC39A-201ENST00000262675 2173 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.04
P04436 CLUL1-203ENST00000540035 2199 ntTSL 2 BASIC8.52□□□□□ -1.04
P04436 NR4A2-201ENST00000339562 3472 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
P04436 AGBL4-202ENST00000371836 1454 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
P04436 SGK1-203ENST00000367857 2414 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
P04436 PGM2-201ENST00000381967 3264 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
P04436 SPATA31D1-201ENST00000344803 4833 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
P04436 LINC01747-202ENST00000441568 2320 ntTSL 2 BASIC8.52□□□□□ -1.05
P04436 LINC01641-202ENST00000445817 1971 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
P04436 LINC02260-201ENST00000508484 2216 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
P04436 AL359682.1-201ENST00000555328 2490 ntTSL 2 BASIC8.52□□□□□ -1.05
P04436 PABPC1L-203ENST00000217075 670 ntTSL 5 BASIC8.52□□□□□ -1.05
P04436 MAJIN-201ENST00000301896 843 ntAPPRIS P3 TSL 5 BASIC8.52□□□□□ -1.05
P04436 AL109615.1-201ENST00000331979 455 ntBASIC8.52□□□□□ -1.05
P04436 UBE2D3-202ENST00000338145 896 ntAPPRIS ALT1 TSL 5 BASIC8.52□□□□□ -1.05
P04436 MEFV-202ENST00000339854 2959 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
P04436 RNASE1-201ENST00000340900 878 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
P04436 HP-204ENST00000398131 1252 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
P04436 EPSTI1-203ENST00000398762 957 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
P04436 GAPDHP72-201ENST00000402643 1010 ntBASIC8.52□□□□□ -1.05
P04436 RPL35P3-201ENST00000403133 371 ntBASIC8.52□□□□□ -1.05
P04436 PDGFC-202ENST00000422544 849 ntTSL 5 BASIC8.52□□□□□ -1.05
P04436 AC006195.1-201ENST00000423599 923 ntBASIC8.52□□□□□ -1.05
P04436 AL008627.1-201ENST00000446953 486 ntBASIC8.52□□□□□ -1.05
P04436 DEFA10P-201ENST00000455014 288 ntBASIC8.52□□□□□ -1.05
P04436 RN7SL845P-201ENST00000484385 290 ntBASIC8.52□□□□□ -1.05
P04436 THAP6-211ENST00000507885 896 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
P04436 AC100849.2-201ENST00000518324 519 ntTSL 2 BASIC8.52□□□□□ -1.05
P04436 TMED10P1-201ENST00000534816 655 ntBASIC8.52□□□□□ -1.05
P04436 MKRN2OS-203ENST00000564146 985 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
P04436 AP005058.1-201ENST00000580193 2975 ntBASIC8.52□□□□□ -1.05
P04436 RN7SL117P-201ENST00000580765 296 ntBASIC8.52□□□□□ -1.05
P04436 AC006504.5-211ENST00000588636 576 ntTSL 4 BASIC8.52□□□□□ -1.05
P04436 ZNF799-204ENST00000595766 576 ntTSL 4 BASIC8.52□□□□□ -1.05
P04436 AL137002.1-201ENST00000600642 182 ntBASIC8.52□□□□□ -1.05
P04436 AC004840.2-201ENST00000603368 285 ntBASIC8.52□□□□□ -1.05
P04436 BNIP3P37-201ENST00000604107 901 ntBASIC8.52□□□□□ -1.05
P04436 AC007663.4-201ENST00000608275 631 ntBASIC8.52□□□□□ -1.05
P04436 ZNF678-205ENST00000608949 929 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
P04436 Metazoa_SRP.101-201ENST00000611704 303 ntBASIC8.52□□□□□ -1.05
P04436 HIST1H4D-201ENST00000614247 312 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
P04436 IFITM2-206ENST00000616316 892 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
P04436 OR7G15P-201ENST00000617262 333 ntBASIC8.52□□□□□ -1.05
P04436 PRSS3P3-202ENST00000618042 682 ntBASIC8.52□□□□□ -1.05
P04436 Metazoa_SRP.190-201ENST00000620330 287 ntBASIC8.52□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms