Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 LINC01734-201ENST00000412672 1518 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SNX18Q96RF0 CLCC1-206ENST00000369970 2078 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
SNX18Q96RF0 ZNF649-201ENST00000354957 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SNX18Q96RF0 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SNX18Q96RF0 HCRTR2-202ENST00000615358 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SNX18Q96RF0 BTN2A3P-204ENST00000466808 2559 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SNX18Q96RF0 IFT122-206ENST00000440957 4007 ntTSL 2 BASIC8.57□□□□□ -1.04
SNX18Q96RF0 GTF3C2-202ENST00000359541 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SNX18Q96RF0 PATE3-201ENST00000445202 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SNX18Q96RF0 FAH-204ENST00000539156 3427 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SNX18Q96RF0 PRSS54-202ENST00000543437 1555 ntTSL 2 BASIC8.57□□□□□ -1.04
SNX18Q96RF0 CMSS1-201ENST00000421999 4330 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SNX18Q96RF0 ZMAT4-201ENST00000297737 2466 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
SNX18Q96RF0 LINC01411-203ENST00000507361 2098 ntTSL 3 BASIC8.57□□□□□ -1.04
SNX18Q96RF0 VSIG1-202ENST00000415430 3236 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
SNX18Q96RF0 SETD7-207ENST00000608958 5281 ntTSL 5 BASIC8.57□□□□□ -1.04
SNX18Q96RF0 KATNAL2-201ENST00000245121 2833 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
SNX18Q96RF0 HSPB3-201ENST00000302005 784 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
SNX18Q96RF0 TAC4-202ENST00000334568 675 ntAPPRIS P4 TSL 1 (best) BASIC8.57□□□□□ -1.04
SNX18Q96RF0 MRPL55-204ENST00000348259 661 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
SNX18Q96RF0 TMIGD3-202ENST00000369717 1150 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SNX18Q96RF0 APOM-201ENST00000375916 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SNX18Q96RF0 APOM-203ENST00000375920 709 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SNX18Q96RF0 Z84484.1-201ENST00000411643 319 ntTSL 3 BASIC8.57□□□□□ -1.04
SNX18Q96RF0 PSAT1P3-201ENST00000439132 1111 ntBASIC8.57□□□□□ -1.04
SNX18Q96RF0 DNM1P24-201ENST00000441091 490 ntBASIC8.57□□□□□ -1.04
SNX18Q96RF0 AC008074.1-201ENST00000441630 723 ntTSL 3 BASIC8.57□□□□□ -1.04
SNX18Q96RF0 AL356276.1-201ENST00000453692 758 ntTSL 3 BASIC8.57□□□□□ -1.04
SNX18Q96RF0 AC005105.1-201ENST00000454851 792 ntBASIC8.57□□□□□ -1.04
SNX18Q96RF0 AC013472.1-202ENST00000455081 558 ntTSL 3 BASIC8.57□□□□□ -1.04
SNX18Q96RF0 AC092953.1-201ENST00000460975 543 ntBASIC8.57□□□□□ -1.04
SNX18Q96RF0 RN7SL430P-201ENST00000464176 242 ntBASIC8.57□□□□□ -1.04
SNX18Q96RF0 RPL34P18-201ENST00000466433 354 ntBASIC8.57□□□□□ -1.04
SNX18Q96RF0 RN7SL252P-201ENST00000496274 297 ntBASIC8.57□□□□□ -1.04
SNX18Q96RF0 MBL1P-202ENST00000497731 758 ntBASIC8.57□□□□□ -1.04
SNX18Q96RF0 S100Z-202ENST00000513010 1017 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SNX18Q96RF0 AC011716.1-201ENST00000520744 613 ntBASIC8.57□□□□□ -1.04
SNX18Q96RF0 AC022733.1-201ENST00000521257 739 ntTSL 3 BASIC8.57□□□□□ -1.04
SNX18Q96RF0 AP000781.2-202ENST00000529411 681 ntAPPRIS P1 TSL 4 BASIC8.57□□□□□ -1.04
SNX18Q96RF0 AC068768.1-202ENST00000541002 1110 ntTSL 5 BASIC8.57□□□□□ -1.04
SNX18Q96RF0 LINC01146-204ENST00000556033 833 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SNX18Q96RF0 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC8.57□□□□□ -1.04
SNX18Q96RF0 AC027088.2-201ENST00000559870 916 ntTSL 3 BASIC8.57□□□□□ -1.04
SNX18Q96RF0 AC127521.1-201ENST00000576086 854 ntTSL 3 BASIC8.57□□□□□ -1.04
SNX18Q96RF0 AC103810.2-201ENST00000577938 559 ntTSL 5 BASIC8.57□□□□□ -1.04
SNX18Q96RF0 AC090358.1-201ENST00000579862 852 ntTSL 3 BASIC8.57□□□□□ -1.04
SNX18Q96RF0 ZNF814-212ENST00000597807 771 ntTSL 2 BASIC8.57□□□□□ -1.04
SNX18Q96RF0 AC091393.1-201ENST00000605088 598 ntBASIC8.57□□□□□ -1.04
SNX18Q96RF0 S100Z-203ENST00000613039 671 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SNX18Q96RF0 AC099518.6-201ENST00000617407 450 ntBASIC8.57□□□□□ -1.04
SNX18Q96RF0 FAM74A4-202ENST00000618177 469 ntBASIC8.57□□□□□ -1.04
SNX18Q96RF0 AC016991.1-201ENST00000621514 385 ntBASIC8.57□□□□□ -1.04
SNX18Q96RF0 AC012629.4-201ENST00000623327 259 ntBASIC8.57□□□□□ -1.04
SNX18Q96RF0 AC145207.5-201ENST00000582866 2682 ntBASIC8.57□□□□□ -1.04
SNX18Q96RF0 SRSF5-217ENST00000557154 1500 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
SNX18Q96RF0 CCNK-201ENST00000389879 3524 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
SNX18Q96RF0 MAOA-201ENST00000338702 4015 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SNX18Q96RF0 GSPT1-201ENST00000420576 1603 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
SNX18Q96RF0 PDE4DIPP1-201ENST00000420737 1641 ntBASIC8.57□□□□□ -1.04
SNX18Q96RF0 AL359752.1-201ENST00000566949 1359 ntBASIC8.57□□□□□ -1.04
SNX18Q96RF0 SLAMF8-201ENST00000289707 2996 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
SNX18Q96RF0 RBM48-201ENST00000265732 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SNX18Q96RF0 AC009061.2-203ENST00000635000 1462 ntTSL 5 BASIC8.57□□□□□ -1.04
SNX18Q96RF0 FASTKD2-202ENST00000402774 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SNX18Q96RF0 RASSF6-201ENST00000307439 5994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
SNX18Q96RF0 ARMC8-215ENST00000471453 2910 ntTSL 2 BASIC8.57□□□□□ -1.04
SNX18Q96RF0 LPXN-201ENST00000395074 1833 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
SNX18Q96RF0 DHX35-203ENST00000373325 3287 ntTSL 5 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 CCT6P2-201ENST00000507234 1593 ntBASIC8.56□□□□□ -1.04
SNX18Q96RF0 NBPF9-201ENST00000483630 1915 ntTSL 5 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 AL590426.1-201ENST00000440811 2285 ntBASIC8.56□□□□□ -1.04
SNX18Q96RF0 AC005524.1-201ENST00000636857 1674 ntBASIC8.56□□□□□ -1.04
SNX18Q96RF0 ZNF561-202ENST00000326044 2017 ntTSL 2 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 MAGEB4-201ENST00000378982 2142 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 NFIA-208ENST00000407417 2123 ntTSL 2 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 MAT2A-201ENST00000306434 2819 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SNX18Q96RF0 AC021491.4-201ENST00000620769 2573 ntBASIC8.56□□□□□ -1.04
SNX18Q96RF0 AF121897.1-201ENST00000411867 3980 ntBASIC8.56□□□□□ -1.04
SNX18Q96RF0 AL132655.3-201ENST00000603095 1619 ntTSL 2 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 CPO-201ENST00000272852 1209 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SNX18Q96RF0 ZNF250-201ENST00000292579 6364 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
SNX18Q96RF0 TRAV18-201ENST00000390446 440 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 ADAM10-203ENST00000402627 861 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SNX18Q96RF0 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 GAPDHP64-201ENST00000419696 1003 ntBASIC8.56□□□□□ -1.04
SNX18Q96RF0 AC006378.1-201ENST00000426193 563 ntTSL 4 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 FTLP2-201ENST00000431458 528 ntBASIC8.56□□□□□ -1.04
SNX18Q96RF0 AL591074.1-201ENST00000437012 797 ntTSL 5 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 UBE2D4-206ENST00000446008 783 ntTSL 2 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 PPIAP16-201ENST00000462517 487 ntBASIC8.56□□□□□ -1.04
SNX18Q96RF0 RN7SL446P-201ENST00000476053 296 ntBASIC8.56□□□□□ -1.04
SNX18Q96RF0 AC055748.1-201ENST00000489836 959 ntBASIC8.56□□□□□ -1.04
SNX18Q96RF0 AC073861.1-201ENST00000496294 459 ntBASIC8.56□□□□□ -1.04
SNX18Q96RF0 AC139491.4-201ENST00000504629 354 ntTSL 5 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 SNORA33.3-201ENST00000516236 136 ntBASIC8.56□□□□□ -1.04
SNX18Q96RF0 COX6C-202ENST00000517682 429 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 AC009119.3-201ENST00000562835 388 ntTSL 3 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 AC016168.2-202ENST00000564292 610 ntTSL 3 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 AC132186.1-201ENST00000566896 354 ntBASIC8.56□□□□□ -1.04
SNX18Q96RF0 AC087392.2-201ENST00000573877 585 ntTSL 2 BASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms