Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL139287.1-201ENST00000444968 386 ntTSL 3 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 RPL10P1-201ENST00000447844 644 ntBASIC8.59□□□□□ -1.03
SNX18Q96RF0 AC004947.1-202ENST00000457000 576 ntTSL 4 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 RPL12P36-201ENST00000470623 478 ntBASIC8.59□□□□□ -1.03
SNX18Q96RF0 RN7SL419P-201ENST00000471592 287 ntBASIC8.59□□□□□ -1.03
SNX18Q96RF0 NCBP2L-201ENST00000509000 660 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 LINC01341-205ENST00000509202 503 ntTSL 4 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 LINC02216-201ENST00000513366 581 ntTSL 4 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 VENTXP6-201ENST00000521543 314 ntBASIC8.59□□□□□ -1.03
SNX18Q96RF0 AC064807.3-201ENST00000523810 470 ntTSL 2 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 C1RL-211ENST00000545280 449 ntTSL 3 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 ENSAP2-201ENST00000554405 352 ntBASIC8.59□□□□□ -1.03
SNX18Q96RF0 AC092114.1-201ENST00000567227 532 ntTSL 4 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 AC104770.1-202ENST00000573698 325 ntTSL 2 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 Metazoa_SRP.121-201ENST00000578843 303 ntBASIC8.59□□□□□ -1.03
SNX18Q96RF0 C17orf62-220ENST00000580560 564 ntTSL 4 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 RN7SL44P-201ENST00000583849 302 ntBASIC8.59□□□□□ -1.03
SNX18Q96RF0 AC060766.1-201ENST00000590824 627 ntBASIC8.59□□□□□ -1.03
SNX18Q96RF0 AC104532.2-201ENST00000591109 589 ntTSL 5 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 RN7SKP4-201ENST00000606815 322 ntBASIC8.59□□□□□ -1.03
SNX18Q96RF0 LINC01730-201ENST00000613868 843 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SNX18Q96RF0 MIR7150-201ENST00000614393 94 ntBASIC8.59□□□□□ -1.03
SNX18Q96RF0 MIR7850-201ENST00000618087 79 ntBASIC8.59□□□□□ -1.03
SNX18Q96RF0 RN7SL627P-201ENST00000620534 303 ntBASIC8.59□□□□□ -1.03
SNX18Q96RF0 AC005796.1-201ENST00000623214 433 ntBASIC8.59□□□□□ -1.03
SNX18Q96RF0 AC092611.3-201ENST00000624858 718 ntBASIC8.59□□□□□ -1.03
SNX18Q96RF0 CYB561A3-221ENST00000546151 3986 ntTSL 3 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 AP001324.3-201ENST00000624759 1428 ntBASIC8.59□□□□□ -1.03
SNX18Q96RF0 ZNF35-202ENST00000396056 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SNX18Q96RF0 SMIM19-204ENST00000438528 2958 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 EIF3D-203ENST00000405442 1851 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.03
SNX18Q96RF0 LINC01120-201ENST00000437751 1861 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SNX18Q96RF0 NCOA4P4-201ENST00000513338 1861 ntBASIC8.59□□□□□ -1.03
SNX18Q96RF0 AL845331.3-201ENST00000562821 2028 ntTSL 2 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 FTSJ3-201ENST00000427159 3559 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SNX18Q96RF0 SNW1-201ENST00000261531 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SNX18Q96RF0 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SNX18Q96RF0 AC138207.6-201ENST00000579164 1967 ntBASIC8.59□□□□□ -1.03
SNX18Q96RF0 AL161636.1-201ENST00000427145 2254 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SNX18Q96RF0 CAPN8-202ENST00000366873 2596 ntTSL 5 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 ZNF714-201ENST00000425625 2562 ntTSL 5 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 AC092132.2-201ENST00000611227 2744 ntBASIC8.59□□□□□ -1.03
SNX18Q96RF0 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SNX18Q96RF0 CPNE4-210ENST00000512332 2230 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SNX18Q96RF0 DSN1-202ENST00000373740 1922 ntAPPRIS ALT2 TSL 3 BASIC8.58□□□□□ -1.04
SNX18Q96RF0 TMEM45B-202ENST00000524567 1639 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SNX18Q96RF0 SH2D4B-202ENST00000339284 3983 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
SNX18Q96RF0 PHACTR1-205ENST00000379350 4784 ntTSL 2 BASIC8.58□□□□□ -1.04
SNX18Q96RF0 ITIH3-211ENST00000621946 3038 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SNX18Q96RF0 CERS6-AS1-201ENST00000425636 2890 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SNX18Q96RF0 AC008014.1-203ENST00000611243 1569 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SNX18Q96RF0 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SNX18Q96RF0 TMEM144-201ENST00000296529 3442 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SNX18Q96RF0 MCFD2-207ENST00000409913 3975 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SNX18Q96RF0 IL36G-201ENST00000259205 1195 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SNX18Q96RF0 SNORA71C-201ENST00000364642 134 ntBASIC8.58□□□□□ -1.04
SNX18Q96RF0 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SNX18Q96RF0 TRBV6-5-201ENST00000390368 410 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
SNX18Q96RF0 TRBV20-1-201ENST00000390394 413 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
SNX18Q96RF0 AC073091.1-201ENST00000398059 864 ntBASIC8.58□□□□□ -1.04
SNX18Q96RF0 AL157401.1-201ENST00000419836 344 ntTSL 2 BASIC8.58□□□□□ -1.04
SNX18Q96RF0 AL121910.1-201ENST00000420710 500 ntTSL 3 BASIC8.58□□□□□ -1.04
SNX18Q96RF0 AC008074.2-201ENST00000425381 429 ntBASIC8.58□□□□□ -1.04
SNX18Q96RF0 IGKV1D-39-201ENST00000448155 376 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
SNX18Q96RF0 UBE2F-SCLY-201ENST00000449191 951 ntAPPRIS P5 TSL 3 BASIC8.58□□□□□ -1.04
SNX18Q96RF0 EPN2-AS1-201ENST00000451099 1190 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SNX18Q96RF0 SNX18P7-201ENST00000454116 635 ntBASIC8.58□□□□□ -1.04
SNX18Q96RF0 AC016820.1-201ENST00000455498 579 ntTSL 2 BASIC8.58□□□□□ -1.04
SNX18Q96RF0 MKRN1-211ENST00000480552 906 ntTSL 5 BASIC8.58□□□□□ -1.04
SNX18Q96RF0 LINC02082-201ENST00000484765 710 ntTSL 2 BASIC8.58□□□□□ -1.04
SNX18Q96RF0 RPS10P5-201ENST00000492704 531 ntBASIC8.58□□□□□ -1.04
SNX18Q96RF0 AC021127.1-201ENST00000503589 566 ntTSL 4 BASIC8.58□□□□□ -1.04
SNX18Q96RF0 AC079238.1-201ENST00000509840 1009 ntBASIC8.58□□□□□ -1.04
SNX18Q96RF0 AARSP1-201ENST00000514795 453 ntBASIC8.58□□□□□ -1.04
SNX18Q96RF0 CD59-208ENST00000527577 686 ntAPPRIS P2 TSL 3 BASIC8.58□□□□□ -1.04
SNX18Q96RF0 AP002986.1-202ENST00000532116 669 ntTSL 3 BASIC8.58□□□□□ -1.04
SNX18Q96RF0 AC135279.2-201ENST00000545001 620 ntBASIC8.58□□□□□ -1.04
SNX18Q96RF0 AC105109.1-201ENST00000556012 1115 ntBASIC8.58□□□□□ -1.04
SNX18Q96RF0 AC131391.1-201ENST00000565359 520 ntTSL 2 BASIC8.58□□□□□ -1.04
SNX18Q96RF0 AL390728.6-201ENST00000566446 1246 ntBASIC8.58□□□□□ -1.04
SNX18Q96RF0 RPL36-205ENST00000579649 449 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
SNX18Q96RF0 NOS2P4-201ENST00000582696 205 ntBASIC8.58□□□□□ -1.04
SNX18Q96RF0 ZNF793-AS1-204ENST00000588845 545 ntTSL 3 BASIC8.58□□□□□ -1.04
SNX18Q96RF0 EAF1-AS1-205ENST00000595975 892 ntTSL 2 BASIC8.58□□□□□ -1.04
SNX18Q96RF0 AC020549.2-201ENST00000604893 508 ntBASIC8.58□□□□□ -1.04
SNX18Q96RF0 FLJ36000-201ENST00000612344 3801 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SNX18Q96RF0 PPARGC1A-216ENST00000612355 936 ntTSL 5 BASIC8.58□□□□□ -1.04
SNX18Q96RF0 FOXP1-220ENST00000614176 6384 ntAPPRIS ALT1 TSL 2 BASIC8.58□□□□□ -1.04
SNX18Q96RF0 AC139768.1-201ENST00000620274 898 ntBASIC8.58□□□□□ -1.04
SNX18Q96RF0 AC100757.2-201ENST00000622316 280 ntBASIC8.58□□□□□ -1.04
SNX18Q96RF0 AC022400.7-201ENST00000625041 1236 ntBASIC8.58□□□□□ -1.04
SNX18Q96RF0 AL732372.1-203ENST00000635159 994 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SNX18Q96RF0 AC012507.4-201ENST00000637275 504 ntTSL 3 BASIC8.58□□□□□ -1.04
SNX18Q96RF0 CD59-213ENST00000533403 1847 ntTSL 3 BASIC8.58□□□□□ -1.04
SNX18Q96RF0 SIRT5-205ENST00000606117 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SNX18Q96RF0 PTBP2-201ENST00000370197 3057 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SNX18Q96RF0 PLCH1-204ENST00000460012 6413 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
SNX18Q96RF0 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SNX18Q96RF0 ZNF233-201ENST00000391958 2784 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms