Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 Metazoa_SRP.60-201ENST00000616888 305 ntBASIC8.61□□□□□ -1.03
SNX18Q96RF0 C6orf203-204ENST00000625458 1146 ntTSL 3 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 RHOXF1P3-201ENST00000635058 502 ntBASIC8.61□□□□□ -1.03
SNX18Q96RF0 AC091939.1-202ENST00000642039 795 ntBASIC8.61□□□□□ -1.03
SNX18Q96RF0 NPR3-202ENST00000326958 6380 ntTSL 2 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 ZRANB2-202ENST00000370920 3078 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
SNX18Q96RF0 ZNF780A-206ENST00000595687 3472 ntAPPRIS P3 TSL 2 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 ABCA11P-201ENST00000451020 1815 ntTSL 2 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 UBE2V1-223ENST00000617119 2432 ntTSL 4 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SNX18Q96RF0 TMEM167A-201ENST00000502346 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SNX18Q96RF0 NBPF9-202ENST00000584027 5034 ntAPPRIS P2 TSL 5 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 MCOLN3-203ENST00000370589 2756 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SNX18Q96RF0 MDH1B-204ENST00000449792 1757 ntTSL 5 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 MDH1B-205ENST00000454776 1795 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 PIGN-251ENST00000640876 6045 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SNX18Q96RF0 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 NPHP1-202ENST00000355301 1932 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SNX18Q96RF0 SMARCA2-263ENST00000637806 7061 ntTSL 5 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 AC114689.1-201ENST00000578727 2484 ntBASIC8.6□□□□□ -1.03
SNX18Q96RF0 DRP2-203ENST00000402866 7018 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 TAF1A-202ENST00000352967 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SNX18Q96RF0 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 FAM13A-212ENST00000508369 3169 ntTSL 5 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SNX18Q96RF0 VWA3B-213ENST00000477737 4454 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SNX18Q96RF0 SH2D4A-202ENST00000518040 1697 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 DDX24-202ENST00000544005 2214 ntTSL 2 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 METTL7A-203ENST00000548553 4076 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 FBXO3-201ENST00000265651 2397 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
SNX18Q96RF0 GSDMC-204ENST00000619643 1831 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 FAM104B-201ENST00000332132 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
SNX18Q96RF0 HSPB11-203ENST00000371377 760 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SNX18Q96RF0 MIR885-201ENST00000401316 74 ntBASIC8.6□□□□□ -1.03
SNX18Q96RF0 RPL15P14-201ENST00000416278 636 ntBASIC8.6□□□□□ -1.03
SNX18Q96RF0 AL592049.1-201ENST00000422490 1188 ntBASIC8.6□□□□□ -1.03
SNX18Q96RF0 AC005301.1-201ENST00000423580 875 ntTSL 5 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 AC083822.1-201ENST00000438001 201 ntBASIC8.6□□□□□ -1.03
SNX18Q96RF0 CFL1P3-201ENST00000440942 490 ntBASIC8.6□□□□□ -1.03
SNX18Q96RF0 AC093166.1-201ENST00000442243 330 ntBASIC8.6□□□□□ -1.03
SNX18Q96RF0 LINC01598-202ENST00000445151 719 ntTSL 5 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 RN7SL209P-201ENST00000488309 276 ntBASIC8.6□□□□□ -1.03
SNX18Q96RF0 AC006978.1-201ENST00000496846 1234 ntBASIC8.6□□□□□ -1.03
SNX18Q96RF0 NUDT19P5-201ENST00000505620 569 ntBASIC8.6□□□□□ -1.03
SNX18Q96RF0 FAM170A-205ENST00000515256 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
SNX18Q96RF0 LIPM-202ENST00000539337 1197 ntTSL 2 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 AC078776.1-201ENST00000546558 562 ntTSL 4 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 GLYCAM1-204ENST00000550226 781 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SNX18Q96RF0 RNASE1-205ENST00000555698 655 ntTSL 3 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 HERC2P4-202ENST00000564145 683 ntTSL 3 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 CMTM3-209ENST00000565003 643 ntTSL 3 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 C6orf229-201ENST00000565469 814 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 AC027682.4-202ENST00000565929 515 ntBASIC8.6□□□□□ -1.03
SNX18Q96RF0 AC129492.4-201ENST00000581248 465 ntTSL 2 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 LINC01912-201ENST00000581844 496 ntTSL 5 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 SOX9-AS1-215ENST00000588177 465 ntTSL 2 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 AC098847.2-202ENST00000592549 959 ntBASIC8.6□□□□□ -1.03
SNX18Q96RF0 AC134879.2-201ENST00000604178 389 ntBASIC8.6□□□□□ -1.03
SNX18Q96RF0 AC245297.3-201ENST00000611769 838 ntTSL 5 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 Metazoa_SRP.206-201ENST00000612004 332 ntBASIC8.6□□□□□ -1.03
SNX18Q96RF0 IGKV2D-29-202ENST00000612356 310 ntBASIC8.6□□□□□ -1.03
SNX18Q96RF0 AL391094.1-201ENST00000612442 966 ntBASIC8.6□□□□□ -1.03
SNX18Q96RF0 Metazoa_SRP.133-201ENST00000612964 317 ntBASIC8.6□□□□□ -1.03
SNX18Q96RF0 EDRF1-AS1-211ENST00000615461 592 ntTSL 5 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 MIR6742-201ENST00000622338 62 ntBASIC8.6□□□□□ -1.03
SNX18Q96RF0 ABCC9-207ENST00000636888 1023 ntTSL 5 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 SCIMP-202ENST00000571800 2155 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SNX18Q96RF0 MOV10-202ENST00000369644 4100 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SNX18Q96RF0 AP1G1-202ENST00000393512 3593 ntAPPRIS ALT1 TSL 5 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 A4GNT-201ENST00000236709 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SNX18Q96RF0 SETD5-201ENST00000302463 4786 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SNX18Q96RF0 KCNA2-203ENST00000485317 2496 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SNX18Q96RF0 SNRNP40-201ENST00000263694 1597 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SNX18Q96RF0 HSFY1-204ENST00000382856 1374 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
SNX18Q96RF0 AC100771.2-201ENST00000525833 1350 ntTSL 3 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 SORD-203ENST00000558580 1395 ntTSL 5 BASIC8.6□□□□□ -1.03
SNX18Q96RF0 TOM1L1-210ENST00000572158 1521 ntAPPRIS ALT1 TSL 2 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 FAM182A-201ENST00000376398 5070 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SNX18Q96RF0 AC009948.1-205ENST00000453026 2007 ntTSL 3 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 MYH2-204ENST00000532183 2528 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SNX18Q96RF0 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 MFSD8-259ENST00000642042 2303 ntBASIC8.59□□□□□ -1.03
SNX18Q96RF0 CCNJL-208ENST00000541762 2965 ntTSL 5 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 TRPS1-209ENST00000519674 3116 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SNX18Q96RF0 ADH5-201ENST00000296412 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SNX18Q96RF0 SORCS1-203ENST00000369698 2638 ntTSL 5 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 PNLIPRP1-201ENST00000358834 1497 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
SNX18Q96RF0 ZNF415-202ENST00000421033 2402 ntAPPRIS P3 TSL 4 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 S100P-201ENST00000296370 1279 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SNX18Q96RF0 C5orf56-202ENST00000378947 621 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 YWHAZ-202ENST00000395948 812 ntTSL 3 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 RNA5SP304-201ENST00000411199 104 ntBASIC8.59□□□□□ -1.03
SNX18Q96RF0 AL136366.1-201ENST00000416996 964 ntTSL 2 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 AL136309.3-201ENST00000427591 266 ntTSL 3 BASIC8.59□□□□□ -1.03
SNX18Q96RF0 DUXAP7-201ENST00000431038 689 ntBASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms