Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC005176.1-203ENST00000597077 532 ntTSL 3 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 RNA5SP357-201ENST00000607318 119 ntBASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 AL591926.7-201ENST00000614301 211 ntBASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 GPC5-204ENST00000618596 960 ntTSL 5 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 AL139093.1-201ENST00000622029 1014 ntBASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 AP000590.1-201ENST00000624943 464 ntBASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 AL627171.2-201ENST00000635177 1090 ntTSL 5 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 STT3A-201ENST00000392708 4558 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 CEP70-210ENST00000481834 2037 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 MEFV-202ENST00000339854 2959 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 ICA1-205ENST00000401396 1742 ntTSL 5 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 AC138907.1-201ENST00000570183 2405 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 CORO2B-203ENST00000543950 3611 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 TJAP1-215ENST00000612912 4312 ntTSL 2 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 LILRB1-204ENST00000396327 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 AC018647.1-201ENST00000432866 1414 ntTSL 5 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 AC009227.1-201ENST00000434635 2362 ntTSL 2 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 B3GALNT1-208ENST00000473285 2123 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 SMIM8-206ENST00000608353 2111 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 TRIT1-203ENST00000441669 1851 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 SCNN1B-208ENST00000568923 1852 ntTSL 3 BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 DYRK4-211ENST00000540757 3272 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NPIPA3F8WFD2 PFKM-225ENST00000551804 2797 ntTSL 5 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 ADGRE3-205ENST00000599900 2099 ntTSL 5 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 YWHAQP5-201ENST00000415616 1382 ntBASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 MR1-201ENST00000282990 2043 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 BECN1-202ENST00000438274 1569 ntTSL 2 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 BMS1P1-202ENST00000580094 4294 ntTSL 5 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 ADGRE2-212ENST00000601345 3128 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 NRXN1-212ENST00000412315 2215 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 ANP32E-203ENST00000436748 1339 ntTSL 2 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 LINC01992-201ENST00000567574 1340 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 AC008507.5-201ENST00000624591 1969 ntBASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 ZBTB10-201ENST00000379091 2181 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 HPS5-206ENST00000531848 2160 ntTSL 5 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 OLMALINC-201ENST00000454935 2551 ntTSL 2 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 LEP-201ENST00000308868 3420 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 PPIE-201ENST00000324379 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 S100A13-201ENST00000339556 514 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 RPS6-202ENST00000380381 892 ntTSL 2 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 CD160-203ENST00000401557 705 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 AL390835.1-201ENST00000413941 901 ntTSL 5 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 FAM236D-201ENST00000419795 433 ntAPPRIS P5 TSL 5 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 FO393418.1-201ENST00000424761 510 ntTSL 4 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 Z83841.1-201ENST00000433173 968 ntBASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 AC000067.1-201ENST00000452326 287 ntTSL 3 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 AL391883.1-201ENST00000454736 447 ntTSL 2 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 HNRNPCP10-201ENST00000457130 884 ntBASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 FAM236D-202ENST00000458170 451 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 AC004534.1-201ENST00000462678 489 ntBASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 RN7SL754P-201ENST00000470784 266 ntBASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 PAQR9-AS1-201ENST00000478823 610 ntTSL 3 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 CD46-214ENST00000480003 1258 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 SSR2-213ENST00000496742 825 ntTSL 3 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 LINC02505-201ENST00000505298 788 ntTSL 5 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 AC021106.2-201ENST00000505310 710 ntBASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 AC026415.1-201ENST00000505404 471 ntTSL 5 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 RPS20-207ENST00000520627 423 ntTSL 5 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 CCND2P1-201ENST00000539268 799 ntBASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 AC078962.2-201ENST00000541885 712 ntTSL 3 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 UBC-213ENST00000546120 718 ntTSL 5 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 AC060814.3-201ENST00000557717 460 ntBASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 AC023034.2-201ENST00000559428 476 ntTSL 3 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 AC009119.3-201ENST00000562835 388 ntTSL 3 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 AC130651.2-201ENST00000573856 536 ntTSL 5 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 CD160-204ENST00000584442 219 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 AC012491.1-201ENST00000605674 799 ntBASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 AC005618.1-202ENST00000606674 544 ntTSL 4 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 Metazoa_SRP.169-201ENST00000613708 283 ntBASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 Metazoa_SRP.140-201ENST00000613842 252 ntBASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 CEACAM5-209ENST00000616453 1160 ntTSL 5 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 Metazoa_SRP.45-201ENST00000620896 299 ntBASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 NCAM1-228ENST00000621128 4698 ntTSL 5 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 AL358790.1-202ENST00000632794 583 ntTSL 5 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 FAM236C-202ENST00000636532 451 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 UGT1A1-202ENST00000360418 3389 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 BZW2-212ENST00000452975 1464 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 TMEM241-201ENST00000383233 2934 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 TRPV3-205ENST00000572519 2937 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 WDR36-204ENST00000513710 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 SVILP1-201ENST00000422642 2676 ntBASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 AC099792.1-202ENST00000635290 2012 ntTSL 5 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 CTAGE14P-201ENST00000397819 2403 ntBASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 WNT3-201ENST00000225512 3355 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 AC008014.1-203ENST00000611243 1569 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
NPIPA3F8WFD2 AGBL3-203ENST00000436302 3533 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 HDAC9-229ENST00000622668 4279 ntTSL 2 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 AC005077.4-201ENST00000421546 3495 ntBASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 ZNF780A-206ENST00000595687 3472 ntAPPRIS P3 TSL 2 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 CDH26-201ENST00000244049 1931 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 UBQLN2-201ENST00000338222 4230 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 BLOC1S6-218ENST00000568816 4013 ntTSL 2 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 IPO5P1-201ENST00000593576 2887 ntBASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 NCF2-203ENST00000413720 2276 ntTSL 2 BASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms