Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SCAF11-202ENST00000369367 7543 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
MTHFRP42898 CASP4-203ENST00000444739 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
MTHFRP42898 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
MTHFRP42898 AC104472.1-201ENST00000399242 1585 ntBASIC9.97□□□□□ -0.81
MTHFRP42898 AL109615.3-201ENST00000422059 2232 ntTSL 2 BASIC9.97□□□□□ -0.81
MTHFRP42898 TPP1-201ENST00000299427 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
MTHFRP42898 RFX2-202ENST00000359161 3595 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.81
MTHFRP42898 SEC61A2-204ENST00000379020 2252 ntTSL 5 BASIC9.96□□□□□ -0.81
MTHFRP42898 OSBPL6-205ENST00000392505 3637 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
MTHFRP42898 PTGS1-207ENST00000619306 5051 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
MTHFRP42898 GRIA3-209ENST00000622768 5173 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.81
MTHFRP42898 CAVIN2-201ENST00000304141 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
MTHFRP42898 MAB21L3-201ENST00000369500 3229 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
MTHFRP42898 RAPGEF6-215ENST00000627212 4694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
MTHFRP42898 AC098614.1-202ENST00000634895 1830 ntBASIC9.96□□□□□ -0.81
MTHFRP42898 DIP2A-202ENST00000417564 6967 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
MTHFRP42898 MAGEA10-202ENST00000370323 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
MTHFRP42898 AC079062.1-202ENST00000581011 2636 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
MTHFRP42898 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
MTHFRP42898 ZNF644-202ENST00000347275 2036 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
MTHFRP42898 RPS6KB1-201ENST00000225577 5375 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
MTHFRP42898 TTTY8B-201ENST00000328819 531 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
MTHFRP42898 TTTY8-201ENST00000329684 531 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
MTHFRP42898 NPIPA5-201ENST00000360151 1088 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
MTHFRP42898 TDRKH-AS1-201ENST00000389897 992 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
MTHFRP42898 AL031864.1-201ENST00000392075 423 ntBASIC9.96□□□□□ -0.82
MTHFRP42898 CYCSP5-201ENST00000415043 297 ntBASIC9.96□□□□□ -0.82
MTHFRP42898 AC092035.1-201ENST00000418538 390 ntBASIC9.96□□□□□ -0.82
MTHFRP42898 AC092100.1-203ENST00000421513 653 ntTSL 3 BASIC9.96□□□□□ -0.82
MTHFRP42898 MIR205HG-204ENST00000431096 908 ntTSL 3 BASIC9.96□□□□□ -0.82
MTHFRP42898 C5orf67-201ENST00000438651 765 ntAPPRIS P2 TSL 3 BASIC9.96□□□□□ -0.82
MTHFRP42898 AC246785.1-201ENST00000440916 264 ntBASIC9.96□□□□□ -0.82
MTHFRP42898 CYP4A22-AS1-201ENST00000444042 921 ntTSL 5 BASIC9.96□□□□□ -0.82
MTHFRP42898 CHCHD4P3-201ENST00000455954 410 ntBASIC9.96□□□□□ -0.82
MTHFRP42898 AC009108.1-201ENST00000473913 796 ntBASIC9.96□□□□□ -0.82
MTHFRP42898 RN7SL687P-201ENST00000480496 285 ntBASIC9.96□□□□□ -0.82
MTHFRP42898 RN7SL800P-201ENST00000484823 280 ntBASIC9.96□□□□□ -0.82
MTHFRP42898 TRIM60P15-201ENST00000509929 712 ntBASIC9.96□□□□□ -0.82
MTHFRP42898 AC104117.2-201ENST00000523735 515 ntBASIC9.96□□□□□ -0.82
MTHFRP42898 AC010650.1-201ENST00000567559 494 ntBASIC9.96□□□□□ -0.82
MTHFRP42898 AC087761.1-201ENST00000568836 556 ntTSL 5 BASIC9.96□□□□□ -0.82
MTHFRP42898 SNX11-206ENST00000580219 1200 ntTSL 2 BASIC9.96□□□□□ -0.82
MTHFRP42898 AC006441.4-201ENST00000583161 636 ntTSL 3 BASIC9.96□□□□□ -0.82
MTHFRP42898 HMGN1P31-201ENST00000590085 304 ntBASIC9.96□□□□□ -0.82
MTHFRP42898 LINC01515-207ENST00000598092 496 ntTSL 3 BASIC9.96□□□□□ -0.82
MTHFRP42898 EIF3H-212ENST00000611080 1265 ntTSL 5 BASIC9.96□□□□□ -0.82
MTHFRP42898 Metazoa_SRP.74-201ENST00000614973 284 ntBASIC9.96□□□□□ -0.82
MTHFRP42898 PKP4-218ENST00000629219 162 ntTSL 5 BASIC9.96□□□□□ -0.82
MTHFRP42898 ZNF397-203ENST00000355632 2162 ntTSL 5 BASIC9.96□□□□□ -0.82
MTHFRP42898 GK5-201ENST00000392993 9837 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
MTHFRP42898 SLAMF7-202ENST00000368042 2365 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
MTHFRP42898 TBX22-202ENST00000373296 2355 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
MTHFRP42898 CLTCL1-202ENST00000427926 5513 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
MTHFRP42898 USP17L12-201ENST00000415041 1593 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
MTHFRP42898 USP17L21-201ENST00000506414 1593 ntAPPRIS P2 BASIC9.96□□□□□ -0.82
MTHFRP42898 APPL2-202ENST00000539978 2680 ntTSL 2 BASIC9.96□□□□□ -0.82
MTHFRP42898 WISP1-202ENST00000250160 3844 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
MTHFRP42898 USP17L10-202ENST00000421288 1677 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
MTHFRP42898 AC020558.3-201ENST00000623335 1703 ntBASIC9.96□□□□□ -0.82
MTHFRP42898 CLDN18-202ENST00000343735 3434 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
MTHFRP42898 TENM2-205ENST00000519204 9427 ntTSL 5 BASIC9.95□□□□□ -0.82
MTHFRP42898 MAPK10-274ENST00000641120 2456 ntBASIC9.95□□□□□ -0.82
MTHFRP42898 LINC02245-201ENST00000449259 2928 ntTSL 5 BASIC9.95□□□□□ -0.82
MTHFRP42898 ATP1A2-201ENST00000361216 5421 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
MTHFRP42898 TRANK1-201ENST00000429976 10481 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
MTHFRP42898 OR4L1-201ENST00000315683 939 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
MTHFRP42898 C10orf82-201ENST00000369210 994 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
MTHFRP42898 CELSR3-AS1-201ENST00000421275 196 ntTSL 2 BASIC9.95□□□□□ -0.82
MTHFRP42898 AP001318.1-201ENST00000476981 321 ntBASIC9.95□□□□□ -0.82
MTHFRP42898 RN7SL215P-201ENST00000487718 298 ntBASIC9.95□□□□□ -0.82
MTHFRP42898 ENPP7P1-201ENST00000509557 999 ntBASIC9.95□□□□□ -0.82
MTHFRP42898 AC020779.2-201ENST00000568984 393 ntTSL 3 BASIC9.95□□□□□ -0.82
MTHFRP42898 RN7SL531P-201ENST00000578464 282 ntBASIC9.95□□□□□ -0.82
MTHFRP42898 MIR3150B-201ENST00000580142 86 ntBASIC9.95□□□□□ -0.82
MTHFRP42898 BSNDP1-201ENST00000613026 367 ntBASIC9.95□□□□□ -0.82
MTHFRP42898 CCL4L2-218ENST00000620576 652 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
MTHFRP42898 AP000962.2-201ENST00000624971 1101 ntBASIC9.95□□□□□ -0.82
MTHFRP42898 AC136603.1-201ENST00000625152 767 ntBASIC9.95□□□□□ -0.82
MTHFRP42898 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC9.95□□□□□ -0.82
MTHFRP42898 PYGB-201ENST00000216962 4134 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
MTHFRP42898 DAPP1-203ENST00000512369 1440 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
MTHFRP42898 BUD13P1-201ENST00000603676 1489 ntBASIC9.95□□□□□ -0.82
MTHFRP42898 MYOF-204ENST00000371489 1519 ntTSL 2 BASIC9.95□□□□□ -0.82
MTHFRP42898 AC012085.2-201ENST00000550287 1587 ntTSL 2 BASIC9.95□□□□□ -0.82
MTHFRP42898 PTPN2-210ENST00000591115 1648 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
MTHFRP42898 LINC01838-201ENST00000595783 1657 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
MTHFRP42898 GREB1L-201ENST00000269218 5600 ntTSL 5 BASIC9.95□□□□□ -0.82
MTHFRP42898 PRNT-202ENST00000418528 1873 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
MTHFRP42898 ZNRF3-AS1-201ENST00000325660 2170 ntTSL 2 BASIC9.95□□□□□ -0.82
MTHFRP42898 ZNF615-215ENST00000618487 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
MTHFRP42898 BNIPL-201ENST00000295294 2336 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
MTHFRP42898 MUSK-201ENST00000189978 2408 ntTSL 5 BASIC9.95□□□□□ -0.82
MTHFRP42898 MUSK-204ENST00000374440 2408 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
MTHFRP42898 ZNF443-201ENST00000301547 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
MTHFRP42898 GABRA2-201ENST00000356504 2770 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
MTHFRP42898 NET1-202ENST00000380359 3253 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
MTHFRP42898 ZC3H7A-201ENST00000355758 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
MTHFRP42898 OTUB2-201ENST00000203664 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
MTHFRP42898 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
MTHFRP42898 RBBP6-201ENST00000319715 6229 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms