Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC139099.4-201ENST00000625083 3504 ntBASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 PTGES3L-201ENST00000409446 1781 ntTSL 2 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 ANK2-216ENST00000510275 1770 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 ZNF304-201ENST00000282286 4202 ntAPPRIS P3 TSL 2 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 ACSM5P1-201ENST00000566754 2438 ntBASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 GJB6-201ENST00000241124 1808 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 DHFR2-206ENST00000619045 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 AC005358.2-201ENST00000584772 3679 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 FAM13A-212ENST00000508369 3169 ntTSL 5 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 S100P-201ENST00000296370 1279 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 LYG1-201ENST00000308528 990 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 PCP4-201ENST00000328619 660 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 DMRTC1B-201ENST00000334036 1197 ntAPPRIS P2 TSL 5 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 CH17-340M24.3-201ENST00000360656 598 ntTSL 2 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 BPHL-202ENST00000380375 1050 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 IGLV8-61-201ENST00000390283 414 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 IGHV1-58-201ENST00000390628 414 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 KYNU-204ENST00000410015 776 ntTSL 2 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 LINC02087-201ENST00000418821 951 ntTSL 2 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 AL157895.1-203ENST00000423551 708 ntTSL 5 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 SNRPCP1-201ENST00000433292 458 ntBASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 ATP6V1G1P3-201ENST00000442568 280 ntBASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 AL512353.1-203ENST00000444563 610 ntTSL 2 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 LINC01054-201ENST00000446989 514 ntTSL 3 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 DEFT1P2-201ENST00000453669 421 ntBASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 DUBR-203ENST00000473550 738 ntTSL 3 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 LINC01322-203ENST00000496693 1075 ntTSL 5 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 AC006978.1-201ENST00000496846 1234 ntBASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 AC087354.1-201ENST00000522373 1037 ntTSL 5 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 SDC2-207ENST00000522911 677 ntTSL 3 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 AC073176.1-201ENST00000560700 534 ntTSL 4 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 ARPP19-203ENST00000561971 799 ntTSL 3 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 AC005185.1-201ENST00000604248 787 ntBASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 AC016747.3-201ENST00000609422 791 ntBASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 AC011840.6-201ENST00000624536 610 ntBASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 OR5G5P-204ENST00000627642 621 ntBASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 CR589904.1-203ENST00000636515 318 ntBASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 AL357143.2-201ENST00000640266 421 ntBASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 ZNF431-207ENST00000600692 1971 ntTSL 5 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 ZSCAN26-207ENST00000623276 1998 ntAPPRIS P2 TSL 3 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 SIX1-201ENST00000247182 3996 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 AC015883.1-201ENST00000623054 2074 ntBASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 MCM5-201ENST00000216122 3534 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 EFHB-201ENST00000295824 2823 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 IL1A-201ENST00000263339 2124 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 TBCCD1-205ENST00000446782 2186 ntTSL 2 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 RALGDS-204ENST00000393157 3689 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 ERI2-201ENST00000300005 1479 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 TEX10-204ENST00000535814 3006 ntTSL 2 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 CTC1-201ENST00000315684 7021 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 RBMS3-201ENST00000273139 1598 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 LINC00426-207ENST00000447147 1589 ntTSL 3 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 ORC1-202ENST00000371568 3157 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 SYNJ1-206ENST00000433931 4852 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 CIDEB-203ENST00000554411 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 MDH1-201ENST00000233114 1650 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 RCAN3-208ENST00000610732 2662 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 DKK2-201ENST00000285311 3638 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 ZC3H7A-201ENST00000355758 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 SLC6A16-201ENST00000335875 2938 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 SCMH1-209ENST00000397174 2977 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 DSG1-201ENST00000257192 5045 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 ZNF184-201ENST00000211936 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 LINC02068-201ENST00000418839 3212 ntTSL 2 BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 ERVV-1-201ENST00000602168 2202 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 PLD2-205ENST00000572940 3391 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 UBE2D3-203ENST00000343106 2389 ntAPPRIS P4 TSL 2 BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 UBAP2-205ENST00000379239 2513 ntTSL 2 BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 MIR5689HG-201ENST00000366312 656 ntTSL 3 BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 HSD17B7-202ENST00000367913 666 ntTSL 2 BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 HIST1H4H-201ENST00000377727 397 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 TRGV1-201ENST00000390348 465 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 CEBPZOS-202ENST00000397064 568 ntAPPRIS P1 TSL 4 BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 PRYP1-201ENST00000412474 445 ntBASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 PRYP2-201ENST00000416652 492 ntBASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 AL671883.1-201ENST00000421191 306 ntBASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 CDC42-IT1-201ENST00000431803 692 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 AL049820.1-201ENST00000442936 423 ntTSL 2 BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 AC010982.1-201ENST00000450325 465 ntTSL 4 BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 ALDH7A1P2-201ENST00000456501 621 ntBASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 APOA2-203ENST00000463812 401 ntTSL 2 BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 PDPN-204ENST00000475043 849 ntTSL 3 BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 MTND6P16-201ENST00000504006 520 ntBASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 AC011487.1-201ENST00000509280 887 ntBASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 AC100861.2-201ENST00000511929 1125 ntTSL 3 BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 RNA5SP40-201ENST00000517147 110 ntBASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 AMN1-207ENST00000536761 1025 ntTSL 2 BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 AMN1-212ENST00000542781 879 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 AC009101.2-202ENST00000564851 490 ntBASIC8.68□□□□□ -1.02
NPIPA3F8WFD2 Z95115.1-202ENST00000565764 981 ntTSL 2 BASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 435.5 ms