Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
LINC01558Q9Y6Z2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01558Q9Y6Z2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01558Q9Y6Z2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC01558Q9Y6Z2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01558Q9Y6Z2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
LINC01558Q9Y6Z2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01558Q9Y6Z2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01558Q9Y6Z2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 AC099778.1-201ENST00000568593 1911 ntBASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 AC099398.1-201ENST00000567919 2776 ntBASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 AC012313.1-201ENST00000593393 3059 ntBASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 NOC2LP2-201ENST00000407594 1944 ntBASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC10.74□□□□□ -0.69
LINC01558Q9Y6Z2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 AL353803.4-201ENST00000565882 1934 ntBASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms