Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
TNFRSF11AQ9Y6Q6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
TNFRSF11AQ9Y6Q6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC25.35■■□□□ 1.65
TNFRSF11AQ9Y6Q6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TNFRSF11AQ9Y6Q6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC25.35■■□□□ 1.65
TNFRSF11AQ9Y6Q6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC25.35■■□□□ 1.65
TNFRSF11AQ9Y6Q6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC25.35■■□□□ 1.65
TNFRSF11AQ9Y6Q6 AC008694.1-202ENST00000636953 945 ntBASIC25.35■■□□□ 1.65
TNFRSF11AQ9Y6Q6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC25.35■■□□□ 1.65
TNFRSF11AQ9Y6Q6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC25.35■■□□□ 1.65
TNFRSF11AQ9Y6Q6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TNFRSF11AQ9Y6Q6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
TNFRSF11AQ9Y6Q6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC25.35■■□□□ 1.65
TNFRSF11AQ9Y6Q6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TNFRSF11AQ9Y6Q6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
TNFRSF11AQ9Y6Q6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TNFRSF11AQ9Y6Q6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TNFRSF11AQ9Y6Q6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TNFRSF11AQ9Y6Q6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TNFRSF11AQ9Y6Q6 SLC29A4P1-201ENST00000398760 971 ntBASIC25.34■■□□□ 1.65
TNFRSF11AQ9Y6Q6 PPP1R14BP2-201ENST00000426284 444 ntBASIC25.34■■□□□ 1.65
TNFRSF11AQ9Y6Q6 AC069152.1-201ENST00000438030 544 ntBASIC25.34■■□□□ 1.65
TNFRSF11AQ9Y6Q6 CDV3P1-201ENST00000471403 739 ntBASIC25.34■■□□□ 1.65
TNFRSF11AQ9Y6Q6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC25.34■■□□□ 1.65
TNFRSF11AQ9Y6Q6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC25.34■■□□□ 1.65
TNFRSF11AQ9Y6Q6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TNFRSF11AQ9Y6Q6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
TNFRSF11AQ9Y6Q6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TNFRSF11AQ9Y6Q6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TNFRSF11AQ9Y6Q6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TNFRSF11AQ9Y6Q6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TNFRSF11AQ9Y6Q6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC25.34■■□□□ 1.65
TNFRSF11AQ9Y6Q6 CLDN5-201ENST00000403084 2357 ntBASIC25.33■■□□□ 1.65
TNFRSF11AQ9Y6Q6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TNFRSF11AQ9Y6Q6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TNFRSF11AQ9Y6Q6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
TNFRSF11AQ9Y6Q6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC25.33■■□□□ 1.65
TNFRSF11AQ9Y6Q6 CYP2T3P-201ENST00000601990 817 ntBASIC25.33■■□□□ 1.65
TNFRSF11AQ9Y6Q6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC25.33■■□□□ 1.65
TNFRSF11AQ9Y6Q6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC25.33■■□□□ 1.65
TNFRSF11AQ9Y6Q6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
TNFRSF11AQ9Y6Q6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
TNFRSF11AQ9Y6Q6 AC011484.1-201ENST00000377652 1995 ntBASIC25.33■■□□□ 1.64
TNFRSF11AQ9Y6Q6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
TNFRSF11AQ9Y6Q6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TNFRSF11AQ9Y6Q6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC25.32■■□□□ 1.64
TNFRSF11AQ9Y6Q6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC25.32■■□□□ 1.64
TNFRSF11AQ9Y6Q6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
TNFRSF11AQ9Y6Q6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TNFRSF11AQ9Y6Q6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
TNFRSF11AQ9Y6Q6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
TNFRSF11AQ9Y6Q6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
TNFRSF11AQ9Y6Q6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC25.31■■□□□ 1.64
TNFRSF11AQ9Y6Q6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TNFRSF11AQ9Y6Q6 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TNFRSF11AQ9Y6Q6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
TNFRSF11AQ9Y6Q6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC25.31■■□□□ 1.64
TNFRSF11AQ9Y6Q6 OR2A1-AS1-201ENST00000462305 773 ntBASIC25.31■■□□□ 1.64
TNFRSF11AQ9Y6Q6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC25.31■■□□□ 1.64
TNFRSF11AQ9Y6Q6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC25.31■■□□□ 1.64
TNFRSF11AQ9Y6Q6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC25.31■■□□□ 1.64
TNFRSF11AQ9Y6Q6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC25.31■■□□□ 1.64
TNFRSF11AQ9Y6Q6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC25.31■■□□□ 1.64
TNFRSF11AQ9Y6Q6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC25.31■■□□□ 1.64
TNFRSF11AQ9Y6Q6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC25.3■■□□□ 1.64
TNFRSF11AQ9Y6Q6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
TNFRSF11AQ9Y6Q6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TNFRSF11AQ9Y6Q6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
TNFRSF11AQ9Y6Q6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
TNFRSF11AQ9Y6Q6 AC083880.1-201ENST00000608266 535 ntBASIC25.3■■□□□ 1.64
TNFRSF11AQ9Y6Q6 MYC-209ENST00000641252 345 ntBASIC25.3■■□□□ 1.64
TNFRSF11AQ9Y6Q6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC25.3■■□□□ 1.64
TNFRSF11AQ9Y6Q6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TNFRSF11AQ9Y6Q6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TNFRSF11AQ9Y6Q6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
TNFRSF11AQ9Y6Q6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
TNFRSF11AQ9Y6Q6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC25.29■■□□□ 1.64
TNFRSF11AQ9Y6Q6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TNFRSF11AQ9Y6Q6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC25.29■■□□□ 1.64
TNFRSF11AQ9Y6Q6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TNFRSF11AQ9Y6Q6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
TNFRSF11AQ9Y6Q6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC25.29■■□□□ 1.64
TNFRSF11AQ9Y6Q6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TNFRSF11AQ9Y6Q6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC25.29■■□□□ 1.64
TNFRSF11AQ9Y6Q6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
TNFRSF11AQ9Y6Q6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC25.29■■□□□ 1.64
TNFRSF11AQ9Y6Q6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC25.29■■□□□ 1.64
TNFRSF11AQ9Y6Q6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC25.29■■□□□ 1.64
TNFRSF11AQ9Y6Q6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC25.29■■□□□ 1.64
TNFRSF11AQ9Y6Q6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC25.29■■□□□ 1.64
TNFRSF11AQ9Y6Q6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
TNFRSF11AQ9Y6Q6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TNFRSF11AQ9Y6Q6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TNFRSF11AQ9Y6Q6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC25.29■■□□□ 1.64
TNFRSF11AQ9Y6Q6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
TNFRSF11AQ9Y6Q6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
TNFRSF11AQ9Y6Q6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC25.28■■□□□ 1.64
TNFRSF11AQ9Y6Q6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TNFRSF11AQ9Y6Q6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC25.28■■□□□ 1.64
TNFRSF11AQ9Y6Q6 AC092118.2-201ENST00000613495 667 ntBASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms