Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.46■■□□□ 1.51
CYP46A1Q9Y6A2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC24.46■■□□□ 1.51
CYP46A1Q9Y6A2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CYP46A1Q9Y6A2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC24.46■■□□□ 1.51
CYP46A1Q9Y6A2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CYP46A1Q9Y6A2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
CYP46A1Q9Y6A2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CYP46A1Q9Y6A2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC24.46■■□□□ 1.51
CYP46A1Q9Y6A2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CYP46A1Q9Y6A2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.51
CYP46A1Q9Y6A2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC24.45■■□□□ 1.5
CYP46A1Q9Y6A2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CYP46A1Q9Y6A2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CYP46A1Q9Y6A2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC24.45■■□□□ 1.5
CYP46A1Q9Y6A2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CYP46A1Q9Y6A2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CYP46A1Q9Y6A2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC24.45■■□□□ 1.5
CYP46A1Q9Y6A2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CYP46A1Q9Y6A2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CYP46A1Q9Y6A2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
CYP46A1Q9Y6A2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC24.44■■□□□ 1.5
CYP46A1Q9Y6A2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CYP46A1Q9Y6A2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CYP46A1Q9Y6A2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.44■■□□□ 1.5
CYP46A1Q9Y6A2 KRT18P61-201ENST00000585825 1298 ntBASIC24.44■■□□□ 1.5
CYP46A1Q9Y6A2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC24.44■■□□□ 1.5
CYP46A1Q9Y6A2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CYP46A1Q9Y6A2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
CYP46A1Q9Y6A2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CYP46A1Q9Y6A2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
CYP46A1Q9Y6A2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC24.43■■□□□ 1.5
CYP46A1Q9Y6A2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CYP46A1Q9Y6A2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CYP46A1Q9Y6A2 KRT19P1-201ENST00000405746 1186 ntBASIC24.43■■□□□ 1.5
CYP46A1Q9Y6A2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.43■■□□□ 1.5
CYP46A1Q9Y6A2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC24.43■■□□□ 1.5
CYP46A1Q9Y6A2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CYP46A1Q9Y6A2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CYP46A1Q9Y6A2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CYP46A1Q9Y6A2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
CYP46A1Q9Y6A2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CYP46A1Q9Y6A2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CYP46A1Q9Y6A2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CYP46A1Q9Y6A2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC24.42■■□□□ 1.5
CYP46A1Q9Y6A2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC24.42■■□□□ 1.5
CYP46A1Q9Y6A2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CYP46A1Q9Y6A2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC24.42■■□□□ 1.5
CYP46A1Q9Y6A2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CYP46A1Q9Y6A2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC24.42■■□□□ 1.5
CYP46A1Q9Y6A2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CYP46A1Q9Y6A2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CYP46A1Q9Y6A2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.42■■□□□ 1.5
CYP46A1Q9Y6A2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.42■■□□□ 1.5
CYP46A1Q9Y6A2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CYP46A1Q9Y6A2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
CYP46A1Q9Y6A2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC24.42■■□□□ 1.5
CYP46A1Q9Y6A2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CYP46A1Q9Y6A2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CYP46A1Q9Y6A2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC24.42■■□□□ 1.5
CYP46A1Q9Y6A2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC24.42■■□□□ 1.5
CYP46A1Q9Y6A2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CYP46A1Q9Y6A2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CYP46A1Q9Y6A2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC24.42■■□□□ 1.5
CYP46A1Q9Y6A2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CYP46A1Q9Y6A2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CYP46A1Q9Y6A2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CYP46A1Q9Y6A2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CYP46A1Q9Y6A2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CYP46A1Q9Y6A2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CYP46A1Q9Y6A2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CYP46A1Q9Y6A2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC24.41■■□□□ 1.5
CYP46A1Q9Y6A2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC24.41■■□□□ 1.5
CYP46A1Q9Y6A2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.41■■□□□ 1.5
CYP46A1Q9Y6A2 SLC7A5P1-201ENST00000568957 537 ntBASIC24.41■■□□□ 1.5
CYP46A1Q9Y6A2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CYP46A1Q9Y6A2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC24.41■■□□□ 1.5
CYP46A1Q9Y6A2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC24.41■■□□□ 1.5
CYP46A1Q9Y6A2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CYP46A1Q9Y6A2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CYP46A1Q9Y6A2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC24.41■■□□□ 1.5
CYP46A1Q9Y6A2 AC116050.2-201ENST00000612102 1779 ntBASIC24.41■■□□□ 1.5
CYP46A1Q9Y6A2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CYP46A1Q9Y6A2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC24.41■■□□□ 1.5
CYP46A1Q9Y6A2 AC020907.5-201ENST00000624372 1936 ntBASIC24.41■■□□□ 1.5
CYP46A1Q9Y6A2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CYP46A1Q9Y6A2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC24.4■■□□□ 1.5
CYP46A1Q9Y6A2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CYP46A1Q9Y6A2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC24.4■■□□□ 1.5
CYP46A1Q9Y6A2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CYP46A1Q9Y6A2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC24.4■■□□□ 1.5
CYP46A1Q9Y6A2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC24.4■■□□□ 1.5
CYP46A1Q9Y6A2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.4■■□□□ 1.5
CYP46A1Q9Y6A2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC24.4■■□□□ 1.5
CYP46A1Q9Y6A2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CYP46A1Q9Y6A2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CYP46A1Q9Y6A2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
CYP46A1Q9Y6A2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
CYP46A1Q9Y6A2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CYP46A1Q9Y6A2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC24.4■■□□□ 1.5
CYP46A1Q9Y6A2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms