Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HCFC2Q9Y5Z7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
HCFC2Q9Y5Z7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.71■■□□□ 1.07
HCFC2Q9Y5Z7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HCFC2Q9Y5Z7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
HCFC2Q9Y5Z7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
HCFC2Q9Y5Z7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HCFC2Q9Y5Z7 TSPY7P-201ENST00000431358 1114 ntBASIC21.71■■□□□ 1.07
HCFC2Q9Y5Z7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.71■■□□□ 1.07
HCFC2Q9Y5Z7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.71■■□□□ 1.07
HCFC2Q9Y5Z7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
HCFC2Q9Y5Z7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.71■■□□□ 1.07
HCFC2Q9Y5Z7 BX088651.1-201ENST00000540551 451 ntBASIC21.71■■□□□ 1.07
HCFC2Q9Y5Z7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.71■■□□□ 1.07
HCFC2Q9Y5Z7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.71■■□□□ 1.07
HCFC2Q9Y5Z7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
HCFC2Q9Y5Z7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HCFC2Q9Y5Z7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.71■■□□□ 1.07
HCFC2Q9Y5Z7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
HCFC2Q9Y5Z7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HCFC2Q9Y5Z7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HCFC2Q9Y5Z7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HCFC2Q9Y5Z7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
HCFC2Q9Y5Z7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
HCFC2Q9Y5Z7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HCFC2Q9Y5Z7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.7■■□□□ 1.06
HCFC2Q9Y5Z7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HCFC2Q9Y5Z7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HCFC2Q9Y5Z7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HCFC2Q9Y5Z7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
HCFC2Q9Y5Z7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.7■■□□□ 1.06
HCFC2Q9Y5Z7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.7■■□□□ 1.06
HCFC2Q9Y5Z7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.7■■□□□ 1.06
HCFC2Q9Y5Z7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HCFC2Q9Y5Z7 AC124016.1-201ENST00000609552 612 ntBASIC21.7■■□□□ 1.06
HCFC2Q9Y5Z7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.7■■□□□ 1.06
HCFC2Q9Y5Z7 AL023875.1-201ENST00000640777 796 ntBASIC21.7■■□□□ 1.06
HCFC2Q9Y5Z7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.7■■□□□ 1.06
HCFC2Q9Y5Z7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
HCFC2Q9Y5Z7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.7■■□□□ 1.06
HCFC2Q9Y5Z7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
HCFC2Q9Y5Z7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HCFC2Q9Y5Z7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HCFC2Q9Y5Z7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HCFC2Q9Y5Z7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HCFC2Q9Y5Z7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HCFC2Q9Y5Z7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HCFC2Q9Y5Z7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
HCFC2Q9Y5Z7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.69■■□□□ 1.06
HCFC2Q9Y5Z7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.69■■□□□ 1.06
HCFC2Q9Y5Z7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HCFC2Q9Y5Z7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.69■■□□□ 1.06
HCFC2Q9Y5Z7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HCFC2Q9Y5Z7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.69■■□□□ 1.06
HCFC2Q9Y5Z7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HCFC2Q9Y5Z7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HCFC2Q9Y5Z7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HCFC2Q9Y5Z7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.69■■□□□ 1.06
HCFC2Q9Y5Z7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.69■■□□□ 1.06
HCFC2Q9Y5Z7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
HCFC2Q9Y5Z7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.69■■□□□ 1.06
HCFC2Q9Y5Z7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HCFC2Q9Y5Z7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
HCFC2Q9Y5Z7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HCFC2Q9Y5Z7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HCFC2Q9Y5Z7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HCFC2Q9Y5Z7 AC133681.1-201ENST00000465482 601 ntBASIC21.68■■□□□ 1.06
HCFC2Q9Y5Z7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
HCFC2Q9Y5Z7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
HCFC2Q9Y5Z7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HCFC2Q9Y5Z7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.68■■□□□ 1.06
HCFC2Q9Y5Z7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
HCFC2Q9Y5Z7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.68■■□□□ 1.06
HCFC2Q9Y5Z7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HCFC2Q9Y5Z7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.68■■□□□ 1.06
HCFC2Q9Y5Z7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HCFC2Q9Y5Z7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HCFC2Q9Y5Z7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HCFC2Q9Y5Z7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.67■■□□□ 1.06
HCFC2Q9Y5Z7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
HCFC2Q9Y5Z7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HCFC2Q9Y5Z7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.67■■□□□ 1.06
HCFC2Q9Y5Z7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HCFC2Q9Y5Z7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HCFC2Q9Y5Z7 KRT17P2-201ENST00000300992 1314 ntBASIC21.67■■□□□ 1.06
HCFC2Q9Y5Z7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HCFC2Q9Y5Z7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HCFC2Q9Y5Z7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HCFC2Q9Y5Z7 AC239809.2-201ENST00000415381 517 ntBASIC21.67■■□□□ 1.06
HCFC2Q9Y5Z7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.67■■□□□ 1.06
HCFC2Q9Y5Z7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HCFC2Q9Y5Z7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.67■■□□□ 1.06
HCFC2Q9Y5Z7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HCFC2Q9Y5Z7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.67■■□□□ 1.06
HCFC2Q9Y5Z7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HCFC2Q9Y5Z7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HCFC2Q9Y5Z7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
HCFC2Q9Y5Z7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.66■■□□□ 1.06
HCFC2Q9Y5Z7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HCFC2Q9Y5Z7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms