Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CDC42BPBQ9Y5S2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC31.52■■■□□ 2.64
CDC42BPBQ9Y5S2 AC113410.3-201ENST00000623366 203 ntBASIC31.52■■■□□ 2.64
CDC42BPBQ9Y5S2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.64
CDC42BPBQ9Y5S2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
CDC42BPBQ9Y5S2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
CDC42BPBQ9Y5S2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CDC42BPBQ9Y5S2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
CDC42BPBQ9Y5S2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
CDC42BPBQ9Y5S2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC31.51■■■□□ 2.63
CDC42BPBQ9Y5S2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.63
CDC42BPBQ9Y5S2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CDC42BPBQ9Y5S2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
CDC42BPBQ9Y5S2 GGT1-206ENST00000404223 952 ntTSL 2 BASIC31.5■■■□□ 2.63
CDC42BPBQ9Y5S2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
CDC42BPBQ9Y5S2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
CDC42BPBQ9Y5S2 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC31.5■■■□□ 2.63
CDC42BPBQ9Y5S2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CDC42BPBQ9Y5S2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC31.5■■■□□ 2.63
CDC42BPBQ9Y5S2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CDC42BPBQ9Y5S2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC31.5■■■□□ 2.63
CDC42BPBQ9Y5S2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
CDC42BPBQ9Y5S2 C1orf229-201ENST00000623686 2258 ntBASIC31.5■■■□□ 2.63
CDC42BPBQ9Y5S2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CDC42BPBQ9Y5S2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CDC42BPBQ9Y5S2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC31.49■■■□□ 2.63
CDC42BPBQ9Y5S2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CDC42BPBQ9Y5S2 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC31.49■■■□□ 2.63
CDC42BPBQ9Y5S2 AC012306.2-201ENST00000609350 630 ntBASIC31.49■■■□□ 2.63
CDC42BPBQ9Y5S2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC31.49■■■□□ 2.63
CDC42BPBQ9Y5S2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CDC42BPBQ9Y5S2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC31.49■■■□□ 2.63
CDC42BPBQ9Y5S2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CDC42BPBQ9Y5S2 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CDC42BPBQ9Y5S2 MIR1224-201ENST00000408193 85 ntBASIC31.49■■■□□ 2.63
CDC42BPBQ9Y5S2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC31.49■■■□□ 2.63
CDC42BPBQ9Y5S2 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC31.49■■■□□ 2.63
CDC42BPBQ9Y5S2 AL023875.1-201ENST00000640777 796 ntBASIC31.49■■■□□ 2.63
CDC42BPBQ9Y5S2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC31.49■■■□□ 2.63
CDC42BPBQ9Y5S2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
CDC42BPBQ9Y5S2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC31.48■■■□□ 2.63
CDC42BPBQ9Y5S2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CDC42BPBQ9Y5S2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CDC42BPBQ9Y5S2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CDC42BPBQ9Y5S2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
CDC42BPBQ9Y5S2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC31.48■■■□□ 2.63
CDC42BPBQ9Y5S2 AC005829.2-201ENST00000571422 1056 ntBASIC31.48■■■□□ 2.63
CDC42BPBQ9Y5S2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CDC42BPBQ9Y5S2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC31.48■■■□□ 2.63
CDC42BPBQ9Y5S2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
CDC42BPBQ9Y5S2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC31.47■■■□□ 2.63
CDC42BPBQ9Y5S2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
CDC42BPBQ9Y5S2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
CDC42BPBQ9Y5S2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CDC42BPBQ9Y5S2 KRASP1-201ENST00000407852 552 ntBASIC31.47■■■□□ 2.63
CDC42BPBQ9Y5S2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CDC42BPBQ9Y5S2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
CDC42BPBQ9Y5S2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC31.47■■■□□ 2.63
CDC42BPBQ9Y5S2 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC31.47■■■□□ 2.63
CDC42BPBQ9Y5S2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC31.46■■■□□ 2.63
CDC42BPBQ9Y5S2 AC087499.1-201ENST00000418141 1075 ntBASIC31.46■■■□□ 2.63
CDC42BPBQ9Y5S2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC31.46■■■□□ 2.63
CDC42BPBQ9Y5S2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC31.46■■■□□ 2.63
CDC42BPBQ9Y5S2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
CDC42BPBQ9Y5S2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
CDC42BPBQ9Y5S2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC31.46■■■□□ 2.63
CDC42BPBQ9Y5S2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CDC42BPBQ9Y5S2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
CDC42BPBQ9Y5S2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CDC42BPBQ9Y5S2 C2orf69P4-201ENST00000565394 541 ntBASIC31.46■■■□□ 2.63
CDC42BPBQ9Y5S2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CDC42BPBQ9Y5S2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CDC42BPBQ9Y5S2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC31.45■■■□□ 2.63
CDC42BPBQ9Y5S2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
CDC42BPBQ9Y5S2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
CDC42BPBQ9Y5S2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CDC42BPBQ9Y5S2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CDC42BPBQ9Y5S2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC31.45■■■□□ 2.63
CDC42BPBQ9Y5S2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC31.45■■■□□ 2.63
CDC42BPBQ9Y5S2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC31.45■■■□□ 2.63
CDC42BPBQ9Y5S2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC31.45■■■□□ 2.63
CDC42BPBQ9Y5S2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC31.45■■■□□ 2.63
CDC42BPBQ9Y5S2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC31.45■■■□□ 2.63
CDC42BPBQ9Y5S2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC31.45■■■□□ 2.63
CDC42BPBQ9Y5S2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.63
CDC42BPBQ9Y5S2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
CDC42BPBQ9Y5S2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CDC42BPBQ9Y5S2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CDC42BPBQ9Y5S2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC31.44■■■□□ 2.62
CDC42BPBQ9Y5S2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CDC42BPBQ9Y5S2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CDC42BPBQ9Y5S2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC31.44■■■□□ 2.62
CDC42BPBQ9Y5S2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CDC42BPBQ9Y5S2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
CDC42BPBQ9Y5S2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CDC42BPBQ9Y5S2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CDC42BPBQ9Y5S2 RER1-204ENST00000378518 522 ntTSL 3 BASIC31.44■■■□□ 2.62
CDC42BPBQ9Y5S2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC31.44■■■□□ 2.62
CDC42BPBQ9Y5S2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC31.44■■■□□ 2.62
CDC42BPBQ9Y5S2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC31.44■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms