Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF11Q9Y3C5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF11Q9Y3C5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF11Q9Y3C5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.07■□□□□ 0.8
RNF11Q9Y3C5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF11Q9Y3C5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.07■□□□□ 0.8
RNF11Q9Y3C5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RNF11Q9Y3C5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF11Q9Y3C5 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF11Q9Y3C5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF11Q9Y3C5 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF11Q9Y3C5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RNF11Q9Y3C5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF11Q9Y3C5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RNF11Q9Y3C5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF11Q9Y3C5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF11Q9Y3C5 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.06■□□□□ 0.8
RNF11Q9Y3C5 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF11Q9Y3C5 CCDC92B-201ENST00000575506 885 ntBASIC20.06■□□□□ 0.8
RNF11Q9Y3C5 AC104187.1-201ENST00000607510 612 ntBASIC20.06■□□□□ 0.8
RNF11Q9Y3C5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF11Q9Y3C5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF11Q9Y3C5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF11Q9Y3C5 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF11Q9Y3C5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF11Q9Y3C5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF11Q9Y3C5 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF11Q9Y3C5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF11Q9Y3C5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF11Q9Y3C5 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF11Q9Y3C5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF11Q9Y3C5 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF11Q9Y3C5 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
RNF11Q9Y3C5 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF11Q9Y3C5 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF11Q9Y3C5 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF11Q9Y3C5 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.05■□□□□ 0.8
RNF11Q9Y3C5 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.05■□□□□ 0.8
RNF11Q9Y3C5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RNF11Q9Y3C5 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF11Q9Y3C5 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF11Q9Y3C5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.05■□□□□ 0.8
RNF11Q9Y3C5 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF11Q9Y3C5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF11Q9Y3C5 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF11Q9Y3C5 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF11Q9Y3C5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF11Q9Y3C5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF11Q9Y3C5 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF11Q9Y3C5 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF11Q9Y3C5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF11Q9Y3C5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF11Q9Y3C5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF11Q9Y3C5 AC010141.2-201ENST00000452426 721 ntBASIC20.04■□□□□ 0.8
RNF11Q9Y3C5 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF11Q9Y3C5 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.04■□□□□ 0.8
RNF11Q9Y3C5 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF11Q9Y3C5 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF11Q9Y3C5 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF11Q9Y3C5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF11Q9Y3C5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF11Q9Y3C5 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF11Q9Y3C5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF11Q9Y3C5 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF11Q9Y3C5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
RNF11Q9Y3C5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF11Q9Y3C5 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RNF11Q9Y3C5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF11Q9Y3C5 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF11Q9Y3C5 KRT18P14-201ENST00000534205 1250 ntBASIC20.03■□□□□ 0.8
RNF11Q9Y3C5 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF11Q9Y3C5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.03■□□□□ 0.8
RNF11Q9Y3C5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RNF11Q9Y3C5 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RNF11Q9Y3C5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF11Q9Y3C5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF11Q9Y3C5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF11Q9Y3C5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF11Q9Y3C5 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
RNF11Q9Y3C5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF11Q9Y3C5 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF11Q9Y3C5 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF11Q9Y3C5 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.02■□□□□ 0.8
RNF11Q9Y3C5 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF11Q9Y3C5 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF11Q9Y3C5 SLC7A5P2-201ENST00000553010 536 ntBASIC20.02■□□□□ 0.8
RNF11Q9Y3C5 DUX4L2-201ENST00000561772 1275 ntBASIC20.02■□□□□ 0.8
RNF11Q9Y3C5 AP001160.3-201ENST00000601484 763 ntBASIC20.02■□□□□ 0.8
RNF11Q9Y3C5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
RNF11Q9Y3C5 DUX4L6-201ENST00000626483 1275 ntBASIC20.02■□□□□ 0.8
RNF11Q9Y3C5 DUX4L1-201ENST00000627662 1275 ntBASIC20.02■□□□□ 0.8
RNF11Q9Y3C5 DUX4L8-201ENST00000629013 1275 ntBASIC20.02■□□□□ 0.8
RNF11Q9Y3C5 DUX4L3-201ENST00000630187 1275 ntBASIC20.02■□□□□ 0.8
RNF11Q9Y3C5 DUX4L7-201ENST00000630678 1275 ntBASIC20.02■□□□□ 0.8
RNF11Q9Y3C5 DUX4L5-201ENST00000630834 1275 ntBASIC20.02■□□□□ 0.8
RNF11Q9Y3C5 RARRES2P11-201ENST00000635158 484 ntBASIC20.02■□□□□ 0.8
RNF11Q9Y3C5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RNF11Q9Y3C5 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF11Q9Y3C5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
RNF11Q9Y3C5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms