Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC25.19■■□□□ 1.62
LEMD3Q9Y2U8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC25.19■■□□□ 1.62
LEMD3Q9Y2U8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC25.19■■□□□ 1.62
LEMD3Q9Y2U8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC25.19■■□□□ 1.62
LEMD3Q9Y2U8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
LEMD3Q9Y2U8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.19■■□□□ 1.62
LEMD3Q9Y2U8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC25.19■■□□□ 1.62
LEMD3Q9Y2U8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
LEMD3Q9Y2U8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC25.19■■□□□ 1.62
LEMD3Q9Y2U8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
LEMD3Q9Y2U8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
LEMD3Q9Y2U8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC25.18■■□□□ 1.62
LEMD3Q9Y2U8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
LEMD3Q9Y2U8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LEMD3Q9Y2U8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LEMD3Q9Y2U8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC25.18■■□□□ 1.62
LEMD3Q9Y2U8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LEMD3Q9Y2U8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
LEMD3Q9Y2U8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LEMD3Q9Y2U8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LEMD3Q9Y2U8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
LEMD3Q9Y2U8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LEMD3Q9Y2U8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LEMD3Q9Y2U8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC25.18■■□□□ 1.62
LEMD3Q9Y2U8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC25.18■■□□□ 1.62
LEMD3Q9Y2U8 AC008550.1-201ENST00000511500 884 ntBASIC25.18■■□□□ 1.62
LEMD3Q9Y2U8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC25.18■■□□□ 1.62
LEMD3Q9Y2U8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC25.18■■□□□ 1.62
LEMD3Q9Y2U8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
LEMD3Q9Y2U8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
LEMD3Q9Y2U8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC25.18■■□□□ 1.62
LEMD3Q9Y2U8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LEMD3Q9Y2U8 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LEMD3Q9Y2U8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
LEMD3Q9Y2U8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
LEMD3Q9Y2U8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
LEMD3Q9Y2U8 MME-217ENST00000616757 1315 ntTSL 5 BASIC25.17■■□□□ 1.62
LEMD3Q9Y2U8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC25.17■■□□□ 1.62
LEMD3Q9Y2U8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC25.17■■□□□ 1.62
LEMD3Q9Y2U8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC25.17■■□□□ 1.62
LEMD3Q9Y2U8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
LEMD3Q9Y2U8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC25.17■■□□□ 1.62
LEMD3Q9Y2U8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
LEMD3Q9Y2U8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
LEMD3Q9Y2U8 ECEL1P1-201ENST00000373592 1742 ntBASIC25.17■■□□□ 1.62
LEMD3Q9Y2U8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC25.17■■□□□ 1.62
LEMD3Q9Y2U8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC25.16■■□□□ 1.62
LEMD3Q9Y2U8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC25.16■■□□□ 1.62
LEMD3Q9Y2U8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC25.16■■□□□ 1.62
LEMD3Q9Y2U8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC25.16■■□□□ 1.62
LEMD3Q9Y2U8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
LEMD3Q9Y2U8 PGM5P4-201ENST00000421970 445 ntBASIC25.16■■□□□ 1.62
LEMD3Q9Y2U8 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
LEMD3Q9Y2U8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
LEMD3Q9Y2U8 C1QBPP2-201ENST00000528754 825 ntBASIC25.16■■□□□ 1.62
LEMD3Q9Y2U8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC25.16■■□□□ 1.62
LEMD3Q9Y2U8 AC233263.1-201ENST00000578059 224 ntBASIC25.16■■□□□ 1.62
LEMD3Q9Y2U8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
LEMD3Q9Y2U8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
LEMD3Q9Y2U8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
LEMD3Q9Y2U8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC25.15■■□□□ 1.62
LEMD3Q9Y2U8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LEMD3Q9Y2U8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC25.15■■□□□ 1.62
LEMD3Q9Y2U8 POM121L13P-201ENST00000422362 380 ntBASIC25.15■■□□□ 1.62
LEMD3Q9Y2U8 AC069544.1-201ENST00000609399 999 ntBASIC25.15■■□□□ 1.62
LEMD3Q9Y2U8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC25.15■■□□□ 1.62
LEMD3Q9Y2U8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LEMD3Q9Y2U8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
LEMD3Q9Y2U8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
LEMD3Q9Y2U8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
LEMD3Q9Y2U8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
LEMD3Q9Y2U8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
LEMD3Q9Y2U8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC25.15■■□□□ 1.62
LEMD3Q9Y2U8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC25.14■■□□□ 1.62
LEMD3Q9Y2U8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
LEMD3Q9Y2U8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC25.14■■□□□ 1.62
LEMD3Q9Y2U8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC25.14■■□□□ 1.62
LEMD3Q9Y2U8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
LEMD3Q9Y2U8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
LEMD3Q9Y2U8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC25.14■■□□□ 1.62
LEMD3Q9Y2U8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC25.14■■□□□ 1.62
LEMD3Q9Y2U8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC25.14■■□□□ 1.62
LEMD3Q9Y2U8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC25.14■■□□□ 1.62
LEMD3Q9Y2U8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC25.14■■□□□ 1.62
LEMD3Q9Y2U8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC25.14■■□□□ 1.62
LEMD3Q9Y2U8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC25.14■■□□□ 1.62
LEMD3Q9Y2U8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC25.14■■□□□ 1.62
LEMD3Q9Y2U8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC25.14■■□□□ 1.62
LEMD3Q9Y2U8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC25.14■■□□□ 1.62
LEMD3Q9Y2U8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC25.14■■□□□ 1.61
LEMD3Q9Y2U8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
LEMD3Q9Y2U8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
LEMD3Q9Y2U8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
LEMD3Q9Y2U8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LEMD3Q9Y2U8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
LEMD3Q9Y2U8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
LEMD3Q9Y2U8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC25.13■■□□□ 1.61
LEMD3Q9Y2U8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC25.13■■□□□ 1.61
LEMD3Q9Y2U8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC25.13■■□□□ 1.61
LEMD3Q9Y2U8 FAM197Y4-202ENST00000622692 608 ntBASIC25.13■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms