Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF6Q9Y252 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF6Q9Y252 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF6Q9Y252 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RNF6Q9Y252 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF6Q9Y252 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RNF6Q9Y252 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF6Q9Y252 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RNF6Q9Y252 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF6Q9Y252 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF6Q9Y252 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF6Q9Y252 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF6Q9Y252 AC026185.1-201ENST00000445748 174 ntBASIC19.35■□□□□ 0.69
RNF6Q9Y252 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF6Q9Y252 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.35■□□□□ 0.69
RNF6Q9Y252 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RNF6Q9Y252 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.35■□□□□ 0.69
RNF6Q9Y252 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF6Q9Y252 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF6Q9Y252 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF6Q9Y252 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF6Q9Y252 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF6Q9Y252 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF6Q9Y252 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RNF6Q9Y252 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF6Q9Y252 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF6Q9Y252 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF6Q9Y252 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RNF6Q9Y252 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF6Q9Y252 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
RNF6Q9Y252 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF6Q9Y252 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF6Q9Y252 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF6Q9Y252 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF6Q9Y252 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF6Q9Y252 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF6Q9Y252 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF6Q9Y252 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF6Q9Y252 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF6Q9Y252 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF6Q9Y252 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
RNF6Q9Y252 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.33■□□□□ 0.69
RNF6Q9Y252 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RNF6Q9Y252 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
RNF6Q9Y252 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.33■□□□□ 0.69
RNF6Q9Y252 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF6Q9Y252 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF6Q9Y252 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF6Q9Y252 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.33■□□□□ 0.68
RNF6Q9Y252 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.33■□□□□ 0.68
RNF6Q9Y252 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.33■□□□□ 0.68
RNF6Q9Y252 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF6Q9Y252 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF6Q9Y252 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF6Q9Y252 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF6Q9Y252 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF6Q9Y252 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF6Q9Y252 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF6Q9Y252 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF6Q9Y252 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF6Q9Y252 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RNF6Q9Y252 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RNF6Q9Y252 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RNF6Q9Y252 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF6Q9Y252 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF6Q9Y252 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF6Q9Y252 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF6Q9Y252 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF6Q9Y252 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF6Q9Y252 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF6Q9Y252 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF6Q9Y252 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF6Q9Y252 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF6Q9Y252 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF6Q9Y252 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF6Q9Y252 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RNF6Q9Y252 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RNF6Q9Y252 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF6Q9Y252 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RNF6Q9Y252 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF6Q9Y252 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF6Q9Y252 AC079140.4-201ENST00000507448 529 ntBASIC19.31■□□□□ 0.68
RNF6Q9Y252 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.31■□□□□ 0.68
RNF6Q9Y252 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF6Q9Y252 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF6Q9Y252 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF6Q9Y252 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF6Q9Y252 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RNF6Q9Y252 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF6Q9Y252 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
RNF6Q9Y252 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF6Q9Y252 GABARAPL3-202ENST00000624044 1851 ntBASIC19.31■□□□□ 0.68
RNF6Q9Y252 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF6Q9Y252 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF6Q9Y252 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF6Q9Y252 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RNF6Q9Y252 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF6Q9Y252 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF6Q9Y252 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF6Q9Y252 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms