Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AL356652.1-201ENST00000615962 565 ntBASIC30.93■■■□□ 2.54
SHANK2Q9UPX8 AC073912.3-201ENST00000624414 853 ntBASIC30.93■■■□□ 2.54
SHANK2Q9UPX8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
SHANK2Q9UPX8 AC233723.2-201ENST00000623798 2106 ntBASIC30.93■■■□□ 2.54
SHANK2Q9UPX8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC30.93■■■□□ 2.54
SHANK2Q9UPX8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
SHANK2Q9UPX8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SHANK2Q9UPX8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
SHANK2Q9UPX8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC30.92■■■□□ 2.54
SHANK2Q9UPX8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SHANK2Q9UPX8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SHANK2Q9UPX8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC30.92■■■□□ 2.54
SHANK2Q9UPX8 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SHANK2Q9UPX8 C2orf69P4-201ENST00000565394 541 ntBASIC30.92■■■□□ 2.54
SHANK2Q9UPX8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SHANK2Q9UPX8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC30.92■■■□□ 2.54
SHANK2Q9UPX8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC30.92■■■□□ 2.54
SHANK2Q9UPX8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC30.92■■■□□ 2.54
SHANK2Q9UPX8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SHANK2Q9UPX8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SHANK2Q9UPX8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SHANK2Q9UPX8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC30.92■■■□□ 2.54
SHANK2Q9UPX8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SHANK2Q9UPX8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC30.91■■■□□ 2.54
SHANK2Q9UPX8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SHANK2Q9UPX8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
SHANK2Q9UPX8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SHANK2Q9UPX8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
SHANK2Q9UPX8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
SHANK2Q9UPX8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
SHANK2Q9UPX8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
SHANK2Q9UPX8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC30.91■■■□□ 2.54
SHANK2Q9UPX8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
SHANK2Q9UPX8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
SHANK2Q9UPX8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
SHANK2Q9UPX8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
SHANK2Q9UPX8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
SHANK2Q9UPX8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC30.91■■■□□ 2.54
SHANK2Q9UPX8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
SHANK2Q9UPX8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC30.9■■■□□ 2.54
SHANK2Q9UPX8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC30.9■■■□□ 2.54
SHANK2Q9UPX8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
SHANK2Q9UPX8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC30.9■■■□□ 2.54
SHANK2Q9UPX8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
SHANK2Q9UPX8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
SHANK2Q9UPX8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SHANK2Q9UPX8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
SHANK2Q9UPX8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
SHANK2Q9UPX8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SHANK2Q9UPX8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
SHANK2Q9UPX8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
SHANK2Q9UPX8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC30.89■■■□□ 2.54
SHANK2Q9UPX8 UBE2SP1-201ENST00000450587 669 ntBASIC30.89■■■□□ 2.54
SHANK2Q9UPX8 RPPH1-201ENST00000516869 333 ntBASIC30.89■■■□□ 2.54
SHANK2Q9UPX8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
SHANK2Q9UPX8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC30.89■■■□□ 2.54
SHANK2Q9UPX8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC30.89■■■□□ 2.54
SHANK2Q9UPX8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC30.89■■■□□ 2.54
SHANK2Q9UPX8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
SHANK2Q9UPX8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC30.89■■■□□ 2.54
SHANK2Q9UPX8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
SHANK2Q9UPX8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
SHANK2Q9UPX8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
SHANK2Q9UPX8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC30.89■■■□□ 2.53
SHANK2Q9UPX8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC30.89■■■□□ 2.53
SHANK2Q9UPX8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC30.88■■■□□ 2.53
SHANK2Q9UPX8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
SHANK2Q9UPX8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC30.88■■■□□ 2.53
SHANK2Q9UPX8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC30.88■■■□□ 2.53
SHANK2Q9UPX8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
SHANK2Q9UPX8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SHANK2Q9UPX8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
SHANK2Q9UPX8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
SHANK2Q9UPX8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC30.88■■■□□ 2.53
SHANK2Q9UPX8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SHANK2Q9UPX8 KRT17P3-201ENST00000420566 1262 ntBASIC30.88■■■□□ 2.53
SHANK2Q9UPX8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC30.88■■■□□ 2.53
SHANK2Q9UPX8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC30.88■■■□□ 2.53
SHANK2Q9UPX8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC30.88■■■□□ 2.53
SHANK2Q9UPX8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC30.88■■■□□ 2.53
SHANK2Q9UPX8 MME-217ENST00000616757 1315 ntTSL 5 BASIC30.88■■■□□ 2.53
SHANK2Q9UPX8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SHANK2Q9UPX8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC30.87■■■□□ 2.53
SHANK2Q9UPX8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SHANK2Q9UPX8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC30.87■■■□□ 2.53
SHANK2Q9UPX8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SHANK2Q9UPX8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SHANK2Q9UPX8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC30.87■■■□□ 2.53
SHANK2Q9UPX8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SHANK2Q9UPX8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SHANK2Q9UPX8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC30.86■■■□□ 2.53
SHANK2Q9UPX8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
SHANK2Q9UPX8 C1QBPP2-201ENST00000528754 825 ntBASIC30.86■■■□□ 2.53
SHANK2Q9UPX8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
SHANK2Q9UPX8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SHANK2Q9UPX8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
SHANK2Q9UPX8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SHANK2Q9UPX8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC30.85■■■□□ 2.53
SHANK2Q9UPX8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
SHANK2Q9UPX8 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms