Protein–RNA interactions for Protein: Q9UMQ6

CAPN11, Calpain-11, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11Q9UMQ6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CAPN11Q9UMQ6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CAPN11Q9UMQ6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.31■■□□□ 1.16
CAPN11Q9UMQ6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CAPN11Q9UMQ6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
CAPN11Q9UMQ6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.31■■□□□ 1.16
CAPN11Q9UMQ6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CAPN11Q9UMQ6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CAPN11Q9UMQ6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.31■■□□□ 1.16
CAPN11Q9UMQ6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.31■■□□□ 1.16
CAPN11Q9UMQ6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.31■■□□□ 1.16
CAPN11Q9UMQ6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.31■■□□□ 1.16
CAPN11Q9UMQ6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.31■■□□□ 1.16
CAPN11Q9UMQ6 AL031432.3-201ENST00000607698 485 ntBASIC22.31■■□□□ 1.16
CAPN11Q9UMQ6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.31■■□□□ 1.16
CAPN11Q9UMQ6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CAPN11Q9UMQ6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CAPN11Q9UMQ6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CAPN11Q9UMQ6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CAPN11Q9UMQ6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.31■■□□□ 1.16
CAPN11Q9UMQ6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.31■■□□□ 1.16
CAPN11Q9UMQ6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CAPN11Q9UMQ6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CAPN11Q9UMQ6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CAPN11Q9UMQ6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.3■■□□□ 1.16
CAPN11Q9UMQ6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.3■■□□□ 1.16
CAPN11Q9UMQ6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.3■■□□□ 1.16
CAPN11Q9UMQ6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CAPN11Q9UMQ6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CAPN11Q9UMQ6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CAPN11Q9UMQ6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CAPN11Q9UMQ6 POU5F1P4-201ENST00000413175 1085 ntBASIC22.3■■□□□ 1.16
CAPN11Q9UMQ6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.3■■□□□ 1.16
CAPN11Q9UMQ6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CAPN11Q9UMQ6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CAPN11Q9UMQ6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.29■■□□□ 1.16
CAPN11Q9UMQ6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CAPN11Q9UMQ6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CAPN11Q9UMQ6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC22.29■■□□□ 1.16
CAPN11Q9UMQ6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.29■■□□□ 1.16
CAPN11Q9UMQ6 AC008175.2-201ENST00000612840 297 ntBASIC22.29■■□□□ 1.16
CAPN11Q9UMQ6 AC110285.6-201ENST00000617652 491 ntBASIC22.29■■□□□ 1.16
CAPN11Q9UMQ6 RARRES2P11-201ENST00000635158 484 ntBASIC22.29■■□□□ 1.16
CAPN11Q9UMQ6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.29■■□□□ 1.16
CAPN11Q9UMQ6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CAPN11Q9UMQ6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.29■■□□□ 1.16
CAPN11Q9UMQ6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CAPN11Q9UMQ6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC22.29■■□□□ 1.16
CAPN11Q9UMQ6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CAPN11Q9UMQ6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CAPN11Q9UMQ6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CAPN11Q9UMQ6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CAPN11Q9UMQ6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.29■■□□□ 1.16
CAPN11Q9UMQ6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CAPN11Q9UMQ6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CAPN11Q9UMQ6 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.28■■□□□ 1.16
CAPN11Q9UMQ6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CAPN11Q9UMQ6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CAPN11Q9UMQ6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.28■■□□□ 1.16
CAPN11Q9UMQ6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
CAPN11Q9UMQ6 AL354811.1-201ENST00000610286 706 ntBASIC22.28■■□□□ 1.16
CAPN11Q9UMQ6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
CAPN11Q9UMQ6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CAPN11Q9UMQ6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CAPN11Q9UMQ6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CAPN11Q9UMQ6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CAPN11Q9UMQ6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
CAPN11Q9UMQ6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CAPN11Q9UMQ6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CAPN11Q9UMQ6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
CAPN11Q9UMQ6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
CAPN11Q9UMQ6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.27■■□□□ 1.16
CAPN11Q9UMQ6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CAPN11Q9UMQ6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CAPN11Q9UMQ6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CAPN11Q9UMQ6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CAPN11Q9UMQ6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CAPN11Q9UMQ6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.27■■□□□ 1.16
CAPN11Q9UMQ6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.27■■□□□ 1.16
CAPN11Q9UMQ6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.27■■□□□ 1.16
CAPN11Q9UMQ6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CAPN11Q9UMQ6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
CAPN11Q9UMQ6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.26■■□□□ 1.15
CAPN11Q9UMQ6 AC092720.2-201ENST00000602388 1665 ntBASIC22.26■■□□□ 1.15
CAPN11Q9UMQ6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CAPN11Q9UMQ6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CAPN11Q9UMQ6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CAPN11Q9UMQ6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC22.26■■□□□ 1.15
CAPN11Q9UMQ6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.26■■□□□ 1.15
CAPN11Q9UMQ6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.26■■□□□ 1.15
CAPN11Q9UMQ6 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.26■■□□□ 1.15
CAPN11Q9UMQ6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.26■■□□□ 1.15
CAPN11Q9UMQ6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CAPN11Q9UMQ6 AC007952.6-201ENST00000573168 2673 ntBASIC22.26■■□□□ 1.15
CAPN11Q9UMQ6 AC003957.1-201ENST00000625108 2673 ntBASIC22.26■■□□□ 1.15
CAPN11Q9UMQ6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.26■■□□□ 1.15
CAPN11Q9UMQ6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.26■■□□□ 1.15
CAPN11Q9UMQ6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CAPN11Q9UMQ6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CAPN11Q9UMQ6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms