Protein–RNA interactions for Protein: Q9UJJ7

RPUSD1, RNA pseudouridylate synthase domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1Q9UJJ7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.12■□□□□ 0.33
RPUSD1Q9UJJ7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.12■□□□□ 0.33
RPUSD1Q9UJJ7 ID1-201ENST00000376105 1233 ntBASIC17.12■□□□□ 0.33
RPUSD1Q9UJJ7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.12■□□□□ 0.33
RPUSD1Q9UJJ7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.12■□□□□ 0.33
RPUSD1Q9UJJ7 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.12■□□□□ 0.33
RPUSD1Q9UJJ7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.12■□□□□ 0.33
RPUSD1Q9UJJ7 CDV3P1-201ENST00000471403 739 ntBASIC17.12■□□□□ 0.33
RPUSD1Q9UJJ7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.12■□□□□ 0.33
RPUSD1Q9UJJ7 AL121832.2-201ENST00000610979 668 ntBASIC17.12■□□□□ 0.33
RPUSD1Q9UJJ7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.12■□□□□ 0.33
RPUSD1Q9UJJ7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RPUSD1Q9UJJ7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPUSD1Q9UJJ7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPUSD1Q9UJJ7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPUSD1Q9UJJ7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPUSD1Q9UJJ7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPUSD1Q9UJJ7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPUSD1Q9UJJ7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPUSD1Q9UJJ7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPUSD1Q9UJJ7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPUSD1Q9UJJ7 GPX1P1-201ENST00000388829 606 ntBASIC17.11■□□□□ 0.33
RPUSD1Q9UJJ7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPUSD1Q9UJJ7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RPUSD1Q9UJJ7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.11■□□□□ 0.33
RPUSD1Q9UJJ7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.11■□□□□ 0.33
RPUSD1Q9UJJ7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.11■□□□□ 0.33
RPUSD1Q9UJJ7 OR10C1-204ENST00000622521 1039 ntBASIC17.11■□□□□ 0.33
RPUSD1Q9UJJ7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPUSD1Q9UJJ7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPUSD1Q9UJJ7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPUSD1Q9UJJ7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.11■□□□□ 0.33
RPUSD1Q9UJJ7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPUSD1Q9UJJ7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPUSD1Q9UJJ7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPUSD1Q9UJJ7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPUSD1Q9UJJ7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.1■□□□□ 0.33
RPUSD1Q9UJJ7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPUSD1Q9UJJ7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPUSD1Q9UJJ7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RPUSD1Q9UJJ7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RPUSD1Q9UJJ7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPUSD1Q9UJJ7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RPUSD1Q9UJJ7 AC083906.2-201ENST00000511578 360 ntBASIC17.1■□□□□ 0.33
RPUSD1Q9UJJ7 AF201337.1-201ENST00000520239 748 ntBASIC17.1■□□□□ 0.33
RPUSD1Q9UJJ7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.1■□□□□ 0.33
RPUSD1Q9UJJ7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.1■□□□□ 0.33
RPUSD1Q9UJJ7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RPUSD1Q9UJJ7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.1■□□□□ 0.33
RPUSD1Q9UJJ7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RPUSD1Q9UJJ7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.1■□□□□ 0.33
RPUSD1Q9UJJ7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPUSD1Q9UJJ7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPUSD1Q9UJJ7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.1■□□□□ 0.33
RPUSD1Q9UJJ7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPUSD1Q9UJJ7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPUSD1Q9UJJ7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPUSD1Q9UJJ7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPUSD1Q9UJJ7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPUSD1Q9UJJ7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPUSD1Q9UJJ7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPUSD1Q9UJJ7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.09■□□□□ 0.33
RPUSD1Q9UJJ7 HLA-L-209ENST00000420110 1011 ntBASIC17.09■□□□□ 0.33
RPUSD1Q9UJJ7 AC007322.3-201ENST00000426526 701 ntBASIC17.09■□□□□ 0.33
RPUSD1Q9UJJ7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.09■□□□□ 0.33
RPUSD1Q9UJJ7 RARRES2P4-201ENST00000514074 484 ntBASIC17.09■□□□□ 0.33
RPUSD1Q9UJJ7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RPUSD1Q9UJJ7 AC016405.3-201ENST00000607710 860 ntBASIC17.09■□□□□ 0.33
RPUSD1Q9UJJ7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RPUSD1Q9UJJ7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RPUSD1Q9UJJ7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPUSD1Q9UJJ7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.09■□□□□ 0.33
RPUSD1Q9UJJ7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RPUSD1Q9UJJ7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RPUSD1Q9UJJ7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
RPUSD1Q9UJJ7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.08■□□□□ 0.33
RPUSD1Q9UJJ7 AC116050.2-201ENST00000612102 1779 ntBASIC17.08■□□□□ 0.33
RPUSD1Q9UJJ7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RPUSD1Q9UJJ7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.08■□□□□ 0.32
RPUSD1Q9UJJ7 AC105036.2-201ENST00000569468 176 ntBASIC17.08■□□□□ 0.32
RPUSD1Q9UJJ7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RPUSD1Q9UJJ7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
RPUSD1Q9UJJ7 FAM21FP-204ENST00000608637 956 ntBASIC17.08■□□□□ 0.32
RPUSD1Q9UJJ7 AL109923.1-201ENST00000618799 583 ntBASIC17.08■□□□□ 0.32
RPUSD1Q9UJJ7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.08■□□□□ 0.32
RPUSD1Q9UJJ7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.08■□□□□ 0.32
RPUSD1Q9UJJ7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.08■□□□□ 0.32
RPUSD1Q9UJJ7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
RPUSD1Q9UJJ7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPUSD1Q9UJJ7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPUSD1Q9UJJ7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPUSD1Q9UJJ7 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.07■□□□□ 0.32
RPUSD1Q9UJJ7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPUSD1Q9UJJ7 AL512625.2-201ENST00000417533 625 ntBASIC17.07■□□□□ 0.32
RPUSD1Q9UJJ7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPUSD1Q9UJJ7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.07■□□□□ 0.32
RPUSD1Q9UJJ7 AC104771.1-201ENST00000603335 964 ntBASIC17.07■□□□□ 0.32
RPUSD1Q9UJJ7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPUSD1Q9UJJ7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPUSD1Q9UJJ7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms