Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 AC120498.10-201ENST00000621827 505 ntBASIC17.76■□□□□ 0.43
TREM2Q9NZC2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.76■□□□□ 0.43
TREM2Q9NZC2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TREM2Q9NZC2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.76■□□□□ 0.43
TREM2Q9NZC2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.76■□□□□ 0.43
TREM2Q9NZC2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TREM2Q9NZC2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.75■□□□□ 0.43
TREM2Q9NZC2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREM2Q9NZC2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREM2Q9NZC2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREM2Q9NZC2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.74■□□□□ 0.43
TREM2Q9NZC2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.74■□□□□ 0.43
TREM2Q9NZC2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TREM2Q9NZC2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREM2Q9NZC2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREM2Q9NZC2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREM2Q9NZC2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREM2Q9NZC2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.74■□□□□ 0.43
TREM2Q9NZC2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.74■□□□□ 0.43
TREM2Q9NZC2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TREM2Q9NZC2 KRT18P20-201ENST00000548986 1279 ntBASIC17.74■□□□□ 0.43
TREM2Q9NZC2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.74■□□□□ 0.43
TREM2Q9NZC2 AC104771.1-201ENST00000603335 964 ntBASIC17.74■□□□□ 0.43
TREM2Q9NZC2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.74■□□□□ 0.43
TREM2Q9NZC2 AL109923.1-201ENST00000618799 583 ntBASIC17.74■□□□□ 0.43
TREM2Q9NZC2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.74■□□□□ 0.43
TREM2Q9NZC2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREM2Q9NZC2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREM2Q9NZC2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREM2Q9NZC2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TREM2Q9NZC2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREM2Q9NZC2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREM2Q9NZC2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREM2Q9NZC2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TREM2Q9NZC2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TREM2Q9NZC2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.73■□□□□ 0.43
TREM2Q9NZC2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TREM2Q9NZC2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TREM2Q9NZC2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
TREM2Q9NZC2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.73■□□□□ 0.43
TREM2Q9NZC2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TREM2Q9NZC2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TREM2Q9NZC2 POU5F1P4-201ENST00000413175 1085 ntBASIC17.73■□□□□ 0.43
TREM2Q9NZC2 AC007322.1-201ENST00000426983 750 ntBASIC17.73■□□□□ 0.43
TREM2Q9NZC2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TREM2Q9NZC2 DUX4L16-201ENST00000555130 1264 ntBASIC17.73■□□□□ 0.43
TREM2Q9NZC2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TREM2Q9NZC2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TREM2Q9NZC2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TREM2Q9NZC2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.73■□□□□ 0.43
TREM2Q9NZC2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TREM2Q9NZC2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TREM2Q9NZC2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.73■□□□□ 0.43
TREM2Q9NZC2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.73■□□□□ 0.43
TREM2Q9NZC2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TREM2Q9NZC2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TREM2Q9NZC2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TREM2Q9NZC2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TREM2Q9NZC2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.72■□□□□ 0.43
TREM2Q9NZC2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREM2Q9NZC2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREM2Q9NZC2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TREM2Q9NZC2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TREM2Q9NZC2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREM2Q9NZC2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TREM2Q9NZC2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.72■□□□□ 0.43
TREM2Q9NZC2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREM2Q9NZC2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREM2Q9NZC2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.72■□□□□ 0.43
TREM2Q9NZC2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TREM2Q9NZC2 AL355802.2-201ENST00000402069 882 ntBASIC17.72■□□□□ 0.43
TREM2Q9NZC2 NCF1B-203ENST00000435988 1254 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms