Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.92■□□□□ 0.78
NDE1Q9NXR1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.92■□□□□ 0.78
NDE1Q9NXR1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NDE1Q9NXR1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NDE1Q9NXR1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NDE1Q9NXR1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NDE1Q9NXR1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NDE1Q9NXR1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NDE1Q9NXR1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NDE1Q9NXR1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NDE1Q9NXR1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.91■□□□□ 0.78
NDE1Q9NXR1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NDE1Q9NXR1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NDE1Q9NXR1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
NDE1Q9NXR1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.91■□□□□ 0.78
NDE1Q9NXR1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.91■□□□□ 0.78
NDE1Q9NXR1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.91■□□□□ 0.78
NDE1Q9NXR1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NDE1Q9NXR1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.91■□□□□ 0.78
NDE1Q9NXR1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.91■□□□□ 0.78
NDE1Q9NXR1 AC012354.3-201ENST00000623734 483 ntBASIC19.91■□□□□ 0.78
NDE1Q9NXR1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
NDE1Q9NXR1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NDE1Q9NXR1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NDE1Q9NXR1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NDE1Q9NXR1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
NDE1Q9NXR1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NDE1Q9NXR1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NDE1Q9NXR1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NDE1Q9NXR1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NDE1Q9NXR1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NDE1Q9NXR1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NDE1Q9NXR1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NDE1Q9NXR1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.9■□□□□ 0.78
NDE1Q9NXR1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
NDE1Q9NXR1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.9■□□□□ 0.78
NDE1Q9NXR1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.9■□□□□ 0.78
NDE1Q9NXR1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NDE1Q9NXR1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.9■□□□□ 0.78
NDE1Q9NXR1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NDE1Q9NXR1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NDE1Q9NXR1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.9■□□□□ 0.78
NDE1Q9NXR1 AL512408.1-201ENST00000569378 2000 ntBASIC19.9■□□□□ 0.78
NDE1Q9NXR1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NDE1Q9NXR1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NDE1Q9NXR1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NDE1Q9NXR1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NDE1Q9NXR1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
NDE1Q9NXR1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
NDE1Q9NXR1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.89■□□□□ 0.77
NDE1Q9NXR1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NDE1Q9NXR1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NDE1Q9NXR1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
NDE1Q9NXR1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NDE1Q9NXR1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NDE1Q9NXR1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
NDE1Q9NXR1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NDE1Q9NXR1 MIR4787-201ENST00000607364 84 ntBASIC19.89■□□□□ 0.77
NDE1Q9NXR1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
NDE1Q9NXR1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NDE1Q9NXR1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NDE1Q9NXR1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
NDE1Q9NXR1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
NDE1Q9NXR1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NDE1Q9NXR1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.89■□□□□ 0.77
NDE1Q9NXR1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.88■□□□□ 0.77
NDE1Q9NXR1 AC116562.4-201ENST00000641316 2276 ntBASIC19.88■□□□□ 0.77
NDE1Q9NXR1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NDE1Q9NXR1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NDE1Q9NXR1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.88■□□□□ 0.77
NDE1Q9NXR1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NDE1Q9NXR1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NDE1Q9NXR1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.88■□□□□ 0.77
NDE1Q9NXR1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
NDE1Q9NXR1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NDE1Q9NXR1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.88■□□□□ 0.77
NDE1Q9NXR1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NDE1Q9NXR1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NDE1Q9NXR1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
NDE1Q9NXR1 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NDE1Q9NXR1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.88■□□□□ 0.77
NDE1Q9NXR1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
NDE1Q9NXR1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NDE1Q9NXR1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.87■□□□□ 0.77
NDE1Q9NXR1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NDE1Q9NXR1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
NDE1Q9NXR1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NDE1Q9NXR1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.87■□□□□ 0.77
NDE1Q9NXR1 AC099778.1-201ENST00000568593 1911 ntBASIC19.87■□□□□ 0.77
NDE1Q9NXR1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NDE1Q9NXR1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NDE1Q9NXR1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.87■□□□□ 0.77
NDE1Q9NXR1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NDE1Q9NXR1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.87■□□□□ 0.77
NDE1Q9NXR1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NDE1Q9NXR1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NDE1Q9NXR1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms