Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHAF3Q9NRP4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.92■□□□□ 0.62
SDHAF3Q9NRP4 AC026310.3-201ENST00000625186 2373 ntBASIC18.92■□□□□ 0.62
SDHAF3Q9NRP4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SDHAF3Q9NRP4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHAF3Q9NRP4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.91■□□□□ 0.62
SDHAF3Q9NRP4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.91■□□□□ 0.62
SDHAF3Q9NRP4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SDHAF3Q9NRP4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SDHAF3Q9NRP4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
SDHAF3Q9NRP4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SDHAF3Q9NRP4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SDHAF3Q9NRP4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SDHAF3Q9NRP4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SDHAF3Q9NRP4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SDHAF3Q9NRP4 AC007322.3-201ENST00000426526 701 ntBASIC18.91■□□□□ 0.62
SDHAF3Q9NRP4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.91■□□□□ 0.62
SDHAF3Q9NRP4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SDHAF3Q9NRP4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SDHAF3Q9NRP4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SDHAF3Q9NRP4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SDHAF3Q9NRP4 AC008694.1-202ENST00000636953 945 ntBASIC18.91■□□□□ 0.62
SDHAF3Q9NRP4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SDHAF3Q9NRP4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SDHAF3Q9NRP4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SDHAF3Q9NRP4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.91■□□□□ 0.62
SDHAF3Q9NRP4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SDHAF3Q9NRP4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.9■□□□□ 0.62
SDHAF3Q9NRP4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHAF3Q9NRP4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHAF3Q9NRP4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHAF3Q9NRP4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHAF3Q9NRP4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHAF3Q9NRP4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SDHAF3Q9NRP4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHAF3Q9NRP4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.9■□□□□ 0.62
SDHAF3Q9NRP4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SDHAF3Q9NRP4 CNN2P6-201ENST00000439038 900 ntBASIC18.9■□□□□ 0.62
SDHAF3Q9NRP4 CDCA4P2-201ENST00000441182 718 ntBASIC18.9■□□□□ 0.62
SDHAF3Q9NRP4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.9■□□□□ 0.62
SDHAF3Q9NRP4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.9■□□□□ 0.62
SDHAF3Q9NRP4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.9■□□□□ 0.62
SDHAF3Q9NRP4 AC069236.1-201ENST00000604339 616 ntBASIC18.9■□□□□ 0.62
SDHAF3Q9NRP4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SDHAF3Q9NRP4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHAF3Q9NRP4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SDHAF3Q9NRP4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.9■□□□□ 0.62
SDHAF3Q9NRP4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.9■□□□□ 0.62
SDHAF3Q9NRP4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHAF3Q9NRP4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SDHAF3Q9NRP4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SDHAF3Q9NRP4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHAF3Q9NRP4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SDHAF3Q9NRP4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SDHAF3Q9NRP4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SDHAF3Q9NRP4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
SDHAF3Q9NRP4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
SDHAF3Q9NRP4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SDHAF3Q9NRP4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.89■□□□□ 0.61
SDHAF3Q9NRP4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SDHAF3Q9NRP4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SDHAF3Q9NRP4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SDHAF3Q9NRP4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SDHAF3Q9NRP4 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.89■□□□□ 0.61
SDHAF3Q9NRP4 AC005181.1-201ENST00000604782 1256 ntBASIC18.89■□□□□ 0.61
SDHAF3Q9NRP4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
SDHAF3Q9NRP4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.89■□□□□ 0.61
SDHAF3Q9NRP4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.89■□□□□ 0.61
SDHAF3Q9NRP4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SDHAF3Q9NRP4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SDHAF3Q9NRP4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SDHAF3Q9NRP4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SDHAF3Q9NRP4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SDHAF3Q9NRP4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SDHAF3Q9NRP4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SDHAF3Q9NRP4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SDHAF3Q9NRP4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SDHAF3Q9NRP4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SDHAF3Q9NRP4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SDHAF3Q9NRP4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SDHAF3Q9NRP4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.88■□□□□ 0.61
SDHAF3Q9NRP4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.88■□□□□ 0.61
SDHAF3Q9NRP4 FAM21FP-204ENST00000608637 956 ntBASIC18.88■□□□□ 0.61
SDHAF3Q9NRP4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.88■□□□□ 0.61
SDHAF3Q9NRP4 AC068338.2-201ENST00000563278 1430 ntBASIC18.88■□□□□ 0.61
SDHAF3Q9NRP4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SDHAF3Q9NRP4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.88■□□□□ 0.61
SDHAF3Q9NRP4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.88■□□□□ 0.61
SDHAF3Q9NRP4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.88■□□□□ 0.61
SDHAF3Q9NRP4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SDHAF3Q9NRP4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SDHAF3Q9NRP4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SDHAF3Q9NRP4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SDHAF3Q9NRP4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.87■□□□□ 0.61
SDHAF3Q9NRP4 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.87■□□□□ 0.61
SDHAF3Q9NRP4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.87■□□□□ 0.61
SDHAF3Q9NRP4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SDHAF3Q9NRP4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SDHAF3Q9NRP4 AC011484.1-201ENST00000377652 1995 ntBASIC18.86■□□□□ 0.61
SDHAF3Q9NRP4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms