Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.97■■□□□ 1.11
TLR9Q9NR96 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TLR9Q9NR96 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TLR9Q9NR96 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TLR9Q9NR96 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TLR9Q9NR96 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TLR9Q9NR96 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TLR9Q9NR96 AC211429.1-201ENST00000415277 523 ntBASIC21.96■■□□□ 1.11
TLR9Q9NR96 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TLR9Q9NR96 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
TLR9Q9NR96 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.96■■□□□ 1.11
TLR9Q9NR96 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TLR9Q9NR96 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.96■■□□□ 1.11
TLR9Q9NR96 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TLR9Q9NR96 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TLR9Q9NR96 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.96■■□□□ 1.11
TLR9Q9NR96 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TLR9Q9NR96 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TLR9Q9NR96 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.95■■□□□ 1.1
TLR9Q9NR96 C1orf229-201ENST00000623686 2258 ntBASIC21.95■■□□□ 1.1
TLR9Q9NR96 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TLR9Q9NR96 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
TLR9Q9NR96 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TLR9Q9NR96 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TLR9Q9NR96 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TLR9Q9NR96 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TLR9Q9NR96 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TLR9Q9NR96 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
TLR9Q9NR96 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.95■■□□□ 1.1
TLR9Q9NR96 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.95■■□□□ 1.1
TLR9Q9NR96 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
TLR9Q9NR96 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.95■■□□□ 1.1
TLR9Q9NR96 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TLR9Q9NR96 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TLR9Q9NR96 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TLR9Q9NR96 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.95■■□□□ 1.1
TLR9Q9NR96 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TLR9Q9NR96 CLDN5-201ENST00000403084 2357 ntBASIC21.95■■□□□ 1.1
TLR9Q9NR96 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TLR9Q9NR96 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
TLR9Q9NR96 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TLR9Q9NR96 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TLR9Q9NR96 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.94■■□□□ 1.1
TLR9Q9NR96 AC012618.2-201ENST00000428058 849 ntBASIC21.94■■□□□ 1.1
TLR9Q9NR96 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TLR9Q9NR96 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TLR9Q9NR96 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TLR9Q9NR96 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TLR9Q9NR96 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
TLR9Q9NR96 AC116050.2-201ENST00000612102 1779 ntBASIC21.94■■□□□ 1.1
TLR9Q9NR96 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TLR9Q9NR96 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TLR9Q9NR96 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TLR9Q9NR96 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TLR9Q9NR96 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
TLR9Q9NR96 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TLR9Q9NR96 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
TLR9Q9NR96 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
TLR9Q9NR96 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
TLR9Q9NR96 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TLR9Q9NR96 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.93■■□□□ 1.1
TLR9Q9NR96 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TLR9Q9NR96 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TLR9Q9NR96 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.93■■□□□ 1.1
TLR9Q9NR96 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TLR9Q9NR96 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.93■■□□□ 1.1
TLR9Q9NR96 C2orf69P4-201ENST00000565394 541 ntBASIC21.93■■□□□ 1.1
TLR9Q9NR96 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TLR9Q9NR96 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.93■■□□□ 1.1
TLR9Q9NR96 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
TLR9Q9NR96 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
TLR9Q9NR96 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
TLR9Q9NR96 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.92■■□□□ 1.1
TLR9Q9NR96 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TLR9Q9NR96 FAM99A-202ENST00000538190 1989 ntBASIC21.92■■□□□ 1.1
TLR9Q9NR96 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
TLR9Q9NR96 AC127496.7-201ENST00000625110 1798 ntBASIC21.92■■□□□ 1.1
TLR9Q9NR96 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TLR9Q9NR96 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.92■■□□□ 1.1
TLR9Q9NR96 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TLR9Q9NR96 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TLR9Q9NR96 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TLR9Q9NR96 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TLR9Q9NR96 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.92■■□□□ 1.1
TLR9Q9NR96 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TLR9Q9NR96 AC233702.5-201ENST00000584107 538 ntBASIC21.92■■□□□ 1.1
TLR9Q9NR96 LINC01023-201ENST00000606054 436 ntBASIC21.92■■□□□ 1.1
TLR9Q9NR96 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.92■■□□□ 1.1
TLR9Q9NR96 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TLR9Q9NR96 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TLR9Q9NR96 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TLR9Q9NR96 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TLR9Q9NR96 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.91■■□□□ 1.1
TLR9Q9NR96 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TLR9Q9NR96 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
TLR9Q9NR96 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.91■■□□□ 1.1
TLR9Q9NR96 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
TLR9Q9NR96 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TLR9Q9NR96 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
TLR9Q9NR96 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms