Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.24■■□□□ 1.31
PDLIM7Q9NR12 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PDLIM7Q9NR12 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.24■■□□□ 1.31
PDLIM7Q9NR12 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PDLIM7Q9NR12 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PDLIM7Q9NR12 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PDLIM7Q9NR12 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
PDLIM7Q9NR12 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PDLIM7Q9NR12 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
PDLIM7Q9NR12 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.23■■□□□ 1.31
PDLIM7Q9NR12 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PDLIM7Q9NR12 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
PDLIM7Q9NR12 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
PDLIM7Q9NR12 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.23■■□□□ 1.31
PDLIM7Q9NR12 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
PDLIM7Q9NR12 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PDLIM7Q9NR12 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.23■■□□□ 1.31
PDLIM7Q9NR12 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
PDLIM7Q9NR12 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PDLIM7Q9NR12 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
PDLIM7Q9NR12 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
PDLIM7Q9NR12 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PDLIM7Q9NR12 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.23■■□□□ 1.31
PDLIM7Q9NR12 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.22■■□□□ 1.31
PDLIM7Q9NR12 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.22■■□□□ 1.31
PDLIM7Q9NR12 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
PDLIM7Q9NR12 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.22■■□□□ 1.31
PDLIM7Q9NR12 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.22■■□□□ 1.31
PDLIM7Q9NR12 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PDLIM7Q9NR12 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.22■■□□□ 1.31
PDLIM7Q9NR12 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.22■■□□□ 1.31
PDLIM7Q9NR12 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDLIM7Q9NR12 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDLIM7Q9NR12 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
PDLIM7Q9NR12 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDLIM7Q9NR12 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.22■■□□□ 1.31
PDLIM7Q9NR12 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDLIM7Q9NR12 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
PDLIM7Q9NR12 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDLIM7Q9NR12 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDLIM7Q9NR12 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.21■■□□□ 1.31
PDLIM7Q9NR12 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDLIM7Q9NR12 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.21■■□□□ 1.31
PDLIM7Q9NR12 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.21■■□□□ 1.31
PDLIM7Q9NR12 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.21■■□□□ 1.31
PDLIM7Q9NR12 RN7SL471P-201ENST00000580476 299 ntBASIC23.21■■□□□ 1.31
PDLIM7Q9NR12 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.21■■□□□ 1.31
PDLIM7Q9NR12 LINC01023-201ENST00000606054 436 ntBASIC23.21■■□□□ 1.31
PDLIM7Q9NR12 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.21■■□□□ 1.31
PDLIM7Q9NR12 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.21■■□□□ 1.31
PDLIM7Q9NR12 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
PDLIM7Q9NR12 AC244015.2-201ENST00000616358 1861 ntBASIC23.21■■□□□ 1.31
PDLIM7Q9NR12 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.21■■□□□ 1.31
PDLIM7Q9NR12 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDLIM7Q9NR12 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.21■■□□□ 1.31
PDLIM7Q9NR12 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDLIM7Q9NR12 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
PDLIM7Q9NR12 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDLIM7Q9NR12 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.2■■□□□ 1.3
PDLIM7Q9NR12 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
PDLIM7Q9NR12 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.2■■□□□ 1.3
PDLIM7Q9NR12 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.2■■□□□ 1.3
PDLIM7Q9NR12 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.2■■□□□ 1.3
PDLIM7Q9NR12 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDLIM7Q9NR12 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDLIM7Q9NR12 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
PDLIM7Q9NR12 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDLIM7Q9NR12 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDLIM7Q9NR12 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC23.2■■□□□ 1.3
PDLIM7Q9NR12 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC23.2■■□□□ 1.3
PDLIM7Q9NR12 AC233263.1-201ENST00000578059 224 ntBASIC23.2■■□□□ 1.3
PDLIM7Q9NR12 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
PDLIM7Q9NR12 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
PDLIM7Q9NR12 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.2■■□□□ 1.3
PDLIM7Q9NR12 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDLIM7Q9NR12 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDLIM7Q9NR12 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDLIM7Q9NR12 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
PDLIM7Q9NR12 RPS20-210ENST00000523936 899 ntTSL 2 BASIC23.19■■□□□ 1.3
PDLIM7Q9NR12 PNMA6B-201ENST00000538162 1200 ntBASIC23.19■■□□□ 1.3
PDLIM7Q9NR12 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
PDLIM7Q9NR12 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PDLIM7Q9NR12 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.18■■□□□ 1.3
PDLIM7Q9NR12 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
PDLIM7Q9NR12 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PDLIM7Q9NR12 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDLIM7Q9NR12 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PDLIM7Q9NR12 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PDLIM7Q9NR12 KRT17P3-201ENST00000420566 1262 ntBASIC23.18■■□□□ 1.3
PDLIM7Q9NR12 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PDLIM7Q9NR12 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC23.18■■□□□ 1.3
PDLIM7Q9NR12 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDLIM7Q9NR12 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDLIM7Q9NR12 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDLIM7Q9NR12 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PDLIM7Q9NR12 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PDLIM7Q9NR12 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDLIM7Q9NR12 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PDLIM7Q9NR12 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDLIM7Q9NR12 FBXW4P1-201ENST00000426721 2239 ntBASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms