Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SEC61A2Q9H9S3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SEC61A2Q9H9S3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SEC61A2Q9H9S3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SEC61A2Q9H9S3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SEC61A2Q9H9S3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SEC61A2Q9H9S3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SEC61A2Q9H9S3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SEC61A2Q9H9S3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.44■□□□□ 0.54
SEC61A2Q9H9S3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SEC61A2Q9H9S3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SEC61A2Q9H9S3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.44■□□□□ 0.54
SEC61A2Q9H9S3 POU5F1P4-201ENST00000413175 1085 ntBASIC18.44■□□□□ 0.54
SEC61A2Q9H9S3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.44■□□□□ 0.54
SEC61A2Q9H9S3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.44■□□□□ 0.54
SEC61A2Q9H9S3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
SEC61A2Q9H9S3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SEC61A2Q9H9S3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
SEC61A2Q9H9S3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SEC61A2Q9H9S3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.43■□□□□ 0.54
SEC61A2Q9H9S3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SEC61A2Q9H9S3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.43■□□□□ 0.54
SEC61A2Q9H9S3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.43■□□□□ 0.54
SEC61A2Q9H9S3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.43■□□□□ 0.54
SEC61A2Q9H9S3 AC137761.2-201ENST00000561729 223 ntBASIC18.43■□□□□ 0.54
SEC61A2Q9H9S3 AC145350.3-201ENST00000569033 163 ntBASIC18.43■□□□□ 0.54
SEC61A2Q9H9S3 AC120498.10-201ENST00000621827 505 ntBASIC18.43■□□□□ 0.54
SEC61A2Q9H9S3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
SEC61A2Q9H9S3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.43■□□□□ 0.54
SEC61A2Q9H9S3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
SEC61A2Q9H9S3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
SEC61A2Q9H9S3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SEC61A2Q9H9S3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SEC61A2Q9H9S3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SEC61A2Q9H9S3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SEC61A2Q9H9S3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SEC61A2Q9H9S3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SEC61A2Q9H9S3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SEC61A2Q9H9S3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SEC61A2Q9H9S3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SEC61A2Q9H9S3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.42■□□□□ 0.54
SEC61A2Q9H9S3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.42■□□□□ 0.54
SEC61A2Q9H9S3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.42■□□□□ 0.54
SEC61A2Q9H9S3 AC138907.5-202ENST00000569484 235 ntBASIC18.42■□□□□ 0.54
SEC61A2Q9H9S3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SEC61A2Q9H9S3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SEC61A2Q9H9S3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SEC61A2Q9H9S3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
SEC61A2Q9H9S3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SEC61A2Q9H9S3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SEC61A2Q9H9S3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SEC61A2Q9H9S3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SEC61A2Q9H9S3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SEC61A2Q9H9S3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SEC61A2Q9H9S3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SEC61A2Q9H9S3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.41■□□□□ 0.54
SEC61A2Q9H9S3 KRT19P1-201ENST00000405746 1186 ntBASIC18.41■□□□□ 0.54
SEC61A2Q9H9S3 AC004911.1-201ENST00000416316 871 ntBASIC18.41■□□□□ 0.54
SEC61A2Q9H9S3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.41■□□□□ 0.54
SEC61A2Q9H9S3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.41■□□□□ 0.54
SEC61A2Q9H9S3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.41■□□□□ 0.54
SEC61A2Q9H9S3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SEC61A2Q9H9S3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SEC61A2Q9H9S3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SEC61A2Q9H9S3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SEC61A2Q9H9S3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SEC61A2Q9H9S3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SEC61A2Q9H9S3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 AL137784.2-201ENST00000607332 1000 ntBASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A2Q9H9S3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.39■□□□□ 0.54
SEC61A2Q9H9S3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SEC61A2Q9H9S3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SEC61A2Q9H9S3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
SEC61A2Q9H9S3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms