Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCNX3Q9H6A9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCNX3Q9H6A9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
PCNX3Q9H6A9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCNX3Q9H6A9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCNX3Q9H6A9 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCNX3Q9H6A9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCNX3Q9H6A9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCNX3Q9H6A9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCNX3Q9H6A9 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCNX3Q9H6A9 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.74■□□□□ 0.59
PCNX3Q9H6A9 NCF1B-203ENST00000435988 1254 ntBASIC18.74■□□□□ 0.59
PCNX3Q9H6A9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.74■□□□□ 0.59
PCNX3Q9H6A9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.74■□□□□ 0.59
PCNX3Q9H6A9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCNX3Q9H6A9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCNX3Q9H6A9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.73■□□□□ 0.59
PCNX3Q9H6A9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PCNX3Q9H6A9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCNX3Q9H6A9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
PCNX3Q9H6A9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCNX3Q9H6A9 AC087633.2-202ENST00000565166 1439 ntBASIC18.73■□□□□ 0.59
PCNX3Q9H6A9 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.73■□□□□ 0.59
PCNX3Q9H6A9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.73■□□□□ 0.59
PCNX3Q9H6A9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCNX3Q9H6A9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCNX3Q9H6A9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCNX3Q9H6A9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.73■□□□□ 0.59
PCNX3Q9H6A9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCNX3Q9H6A9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCNX3Q9H6A9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
PCNX3Q9H6A9 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCNX3Q9H6A9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCNX3Q9H6A9 ID1-201ENST00000376105 1233 ntBASIC18.73■□□□□ 0.59
PCNX3Q9H6A9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.73■□□□□ 0.59
PCNX3Q9H6A9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.73■□□□□ 0.59
PCNX3Q9H6A9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCNX3Q9H6A9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.73■□□□□ 0.59
PCNX3Q9H6A9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.73■□□□□ 0.59
PCNX3Q9H6A9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCNX3Q9H6A9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCNX3Q9H6A9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
PCNX3Q9H6A9 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCNX3Q9H6A9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCNX3Q9H6A9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.72■□□□□ 0.59
PCNX3Q9H6A9 MKRN4P-201ENST00000444706 1521 ntBASIC18.72■□□□□ 0.59
PCNX3Q9H6A9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCNX3Q9H6A9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.72■□□□□ 0.59
PCNX3Q9H6A9 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.72■□□□□ 0.59
PCNX3Q9H6A9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.72■□□□□ 0.59
PCNX3Q9H6A9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCNX3Q9H6A9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCNX3Q9H6A9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCNX3Q9H6A9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCNX3Q9H6A9 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.72■□□□□ 0.59
PCNX3Q9H6A9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.72■□□□□ 0.59
PCNX3Q9H6A9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCNX3Q9H6A9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCNX3Q9H6A9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCNX3Q9H6A9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCNX3Q9H6A9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCNX3Q9H6A9 AL121603.2-201ENST00000557373 2117 ntBASIC18.71■□□□□ 0.59
PCNX3Q9H6A9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCNX3Q9H6A9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.71■□□□□ 0.59
PCNX3Q9H6A9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCNX3Q9H6A9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCNX3Q9H6A9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.71■□□□□ 0.59
PCNX3Q9H6A9 AC133552.2-202ENST00000575694 574 ntBASIC18.71■□□□□ 0.59
PCNX3Q9H6A9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.71■□□□□ 0.59
PCNX3Q9H6A9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.71■□□□□ 0.59
PCNX3Q9H6A9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCNX3Q9H6A9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.71■□□□□ 0.59
PCNX3Q9H6A9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
PCNX3Q9H6A9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.71■□□□□ 0.59
PCNX3Q9H6A9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCNX3Q9H6A9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCNX3Q9H6A9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCNX3Q9H6A9 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.7■□□□□ 0.58
PCNX3Q9H6A9 AL591742.1-201ENST00000604433 565 ntBASIC18.7■□□□□ 0.58
PCNX3Q9H6A9 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.7■□□□□ 0.58
PCNX3Q9H6A9 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.7■□□□□ 0.58
PCNX3Q9H6A9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.7■□□□□ 0.58
PCNX3Q9H6A9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCNX3Q9H6A9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PCNX3Q9H6A9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCNX3Q9H6A9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCNX3Q9H6A9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
PCNX3Q9H6A9 AC010980.2-201ENST00000587099 1412 ntBASIC18.7■□□□□ 0.58
PCNX3Q9H6A9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCNX3Q9H6A9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCNX3Q9H6A9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCNX3Q9H6A9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.7■□□□□ 0.58
PCNX3Q9H6A9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
PCNX3Q9H6A9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCNX3Q9H6A9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCNX3Q9H6A9 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCNX3Q9H6A9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.69■□□□□ 0.58
PCNX3Q9H6A9 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.69■□□□□ 0.58
PCNX3Q9H6A9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PCNX3Q9H6A9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms