Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MAP1LC3AQ9H492 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
MAP1LC3AQ9H492 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MAP1LC3AQ9H492 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
MAP1LC3AQ9H492 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.04■□□□□ -0
MAP1LC3AQ9H492 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.04■□□□□ -0
MAP1LC3AQ9H492 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC15.04■□□□□ -0
MAP1LC3AQ9H492 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.04■□□□□ -0
MAP1LC3AQ9H492 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.04■□□□□ -0
MAP1LC3AQ9H492 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
MAP1LC3AQ9H492 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.04■□□□□ -0
MAP1LC3AQ9H492 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC15.04■□□□□ -0
MAP1LC3AQ9H492 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC15.04■□□□□ -0
MAP1LC3AQ9H492 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
MAP1LC3AQ9H492 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.04■□□□□ -0
MAP1LC3AQ9H492 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
MAP1LC3AQ9H492 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
MAP1LC3AQ9H492 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
MAP1LC3AQ9H492 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MAP1LC3AQ9H492 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MAP1LC3AQ9H492 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
MAP1LC3AQ9H492 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
MAP1LC3AQ9H492 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MAP1LC3AQ9H492 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MAP1LC3AQ9H492 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MAP1LC3AQ9H492 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MAP1LC3AQ9H492 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.02■□□□□ -0
MAP1LC3AQ9H492 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MAP1LC3AQ9H492 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MAP1LC3AQ9H492 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.02■□□□□ -0
MAP1LC3AQ9H492 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MAP1LC3AQ9H492 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MAP1LC3AQ9H492 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC15.02■□□□□ -0
MAP1LC3AQ9H492 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC15.02■□□□□ -0
MAP1LC3AQ9H492 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
MAP1LC3AQ9H492 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC15.02□□□□□ -0.01
MAP1LC3AQ9H492 AL162377.1-201ENST00000618844 1793 ntBASIC15.02□□□□□ -0.01
MAP1LC3AQ9H492 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MAP1LC3AQ9H492 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MAP1LC3AQ9H492 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MAP1LC3AQ9H492 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.02□□□□□ -0.01
MAP1LC3AQ9H492 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.02□□□□□ -0.01
MAP1LC3AQ9H492 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MAP1LC3AQ9H492 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
MAP1LC3AQ9H492 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
MAP1LC3AQ9H492 AL512408.1-201ENST00000569378 2000 ntBASIC15.02□□□□□ -0.01
MAP1LC3AQ9H492 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
MAP1LC3AQ9H492 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MAP1LC3AQ9H492 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MAP1LC3AQ9H492 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
MAP1LC3AQ9H492 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MAP1LC3AQ9H492 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MAP1LC3AQ9H492 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MAP1LC3AQ9H492 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.01□□□□□ -0.01
MAP1LC3AQ9H492 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
MAP1LC3AQ9H492 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MAP1LC3AQ9H492 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MAP1LC3AQ9H492 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MAP1LC3AQ9H492 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.01□□□□□ -0.01
MAP1LC3AQ9H492 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
MAP1LC3AQ9H492 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
MAP1LC3AQ9H492 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MAP1LC3AQ9H492 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC15.01□□□□□ -0.01
MAP1LC3AQ9H492 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
MAP1LC3AQ9H492 PVT1_1.1-201ENST00000615125 194 ntBASIC15.01□□□□□ -0.01
MAP1LC3AQ9H492 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms