Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
VPS16Q9H269 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.64■■□□□ 1.21
VPS16Q9H269 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.64■■□□□ 1.21
VPS16Q9H269 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
VPS16Q9H269 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.64■■□□□ 1.21
VPS16Q9H269 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.64■■□□□ 1.21
VPS16Q9H269 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.64■■□□□ 1.21
VPS16Q9H269 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
VPS16Q9H269 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC22.64■■□□□ 1.21
VPS16Q9H269 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
VPS16Q9H269 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
VPS16Q9H269 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
VPS16Q9H269 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
VPS16Q9H269 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.64■■□□□ 1.21
VPS16Q9H269 AL512408.1-201ENST00000569378 2000 ntBASIC22.64■■□□□ 1.21
VPS16Q9H269 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
VPS16Q9H269 AC112907.3-201ENST00000577781 2400 ntBASIC22.63■■□□□ 1.21
VPS16Q9H269 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.63■■□□□ 1.21
VPS16Q9H269 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.63■■□□□ 1.21
VPS16Q9H269 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.63■■□□□ 1.21
VPS16Q9H269 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
VPS16Q9H269 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.63■■□□□ 1.21
VPS16Q9H269 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS16Q9H269 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
VPS16Q9H269 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.63■■□□□ 1.21
VPS16Q9H269 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
VPS16Q9H269 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.63■■□□□ 1.21
VPS16Q9H269 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS16Q9H269 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS16Q9H269 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
VPS16Q9H269 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS16Q9H269 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.63■■□□□ 1.21
VPS16Q9H269 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
VPS16Q9H269 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.63■■□□□ 1.21
VPS16Q9H269 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS16Q9H269 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VPS16Q9H269 AFG3L1P-217ENST00000557444 2447 ntBASIC22.62■■□□□ 1.21
VPS16Q9H269 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.62■■□□□ 1.21
VPS16Q9H269 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC22.62■■□□□ 1.21
VPS16Q9H269 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VPS16Q9H269 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22.62■■□□□ 1.21
VPS16Q9H269 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.62■■□□□ 1.21
VPS16Q9H269 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VPS16Q9H269 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VPS16Q9H269 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
VPS16Q9H269 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VPS16Q9H269 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
VPS16Q9H269 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.61■■□□□ 1.21
VPS16Q9H269 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
VPS16Q9H269 AL139246.5-201ENST00000606645 996 ntBASIC22.61■■□□□ 1.21
VPS16Q9H269 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
VPS16Q9H269 AL358852.1-201ENST00000623174 1268 ntBASIC22.61■■□□□ 1.21
VPS16Q9H269 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
VPS16Q9H269 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.61■■□□□ 1.21
VPS16Q9H269 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC22.61■■□□□ 1.21
VPS16Q9H269 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
VPS16Q9H269 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.61■■□□□ 1.21
VPS16Q9H269 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
VPS16Q9H269 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
VPS16Q9H269 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
VPS16Q9H269 AC079140.4-201ENST00000507448 529 ntBASIC22.6■■□□□ 1.21
VPS16Q9H269 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.6■■□□□ 1.21
VPS16Q9H269 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.6■■□□□ 1.21
VPS16Q9H269 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.6■■□□□ 1.21
VPS16Q9H269 AC008175.2-201ENST00000612840 297 ntBASIC22.6■■□□□ 1.21
VPS16Q9H269 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
VPS16Q9H269 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.6■■□□□ 1.21
VPS16Q9H269 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
VPS16Q9H269 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
VPS16Q9H269 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
VPS16Q9H269 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.6■■□□□ 1.21
VPS16Q9H269 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
VPS16Q9H269 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
VPS16Q9H269 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.59■■□□□ 1.21
VPS16Q9H269 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
VPS16Q9H269 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
VPS16Q9H269 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
VPS16Q9H269 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
VPS16Q9H269 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
VPS16Q9H269 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
VPS16Q9H269 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.59■■□□□ 1.21
VPS16Q9H269 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
VPS16Q9H269 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.59■■□□□ 1.21
VPS16Q9H269 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
VPS16Q9H269 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.59■■□□□ 1.21
VPS16Q9H269 AC142381.2-201ENST00000566120 298 ntBASIC22.59■■□□□ 1.21
VPS16Q9H269 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
VPS16Q9H269 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
VPS16Q9H269 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.58■■□□□ 1.21
VPS16Q9H269 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
VPS16Q9H269 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
VPS16Q9H269 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
VPS16Q9H269 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
VPS16Q9H269 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
VPS16Q9H269 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.58■■□□□ 1.21
VPS16Q9H269 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.58■■□□□ 1.21
VPS16Q9H269 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.58■■□□□ 1.21
VPS16Q9H269 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.58■■□□□ 1.21
VPS16Q9H269 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.58■■□□□ 1.21
VPS16Q9H269 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms