Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
UPF3BQ9BZI7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
UPF3BQ9BZI7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC24.57■■□□□ 1.52
UPF3BQ9BZI7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
UPF3BQ9BZI7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
UPF3BQ9BZI7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
UPF3BQ9BZI7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
UPF3BQ9BZI7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC24.56■■□□□ 1.52
UPF3BQ9BZI7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
UPF3BQ9BZI7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC24.56■■□□□ 1.52
UPF3BQ9BZI7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
UPF3BQ9BZI7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC24.56■■□□□ 1.52
UPF3BQ9BZI7 AC004854.2-201ENST00000608450 1441 ntBASIC24.56■■□□□ 1.52
UPF3BQ9BZI7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
UPF3BQ9BZI7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC24.56■■□□□ 1.52
UPF3BQ9BZI7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.56■■□□□ 1.52
UPF3BQ9BZI7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.56■■□□□ 1.52
UPF3BQ9BZI7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
UPF3BQ9BZI7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.56■■□□□ 1.52
UPF3BQ9BZI7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
UPF3BQ9BZI7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
UPF3BQ9BZI7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.56■■□□□ 1.52
UPF3BQ9BZI7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
UPF3BQ9BZI7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC24.56■■□□□ 1.52
UPF3BQ9BZI7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
UPF3BQ9BZI7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC24.56■■□□□ 1.52
UPF3BQ9BZI7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC24.56■■□□□ 1.52
UPF3BQ9BZI7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
UPF3BQ9BZI7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
UPF3BQ9BZI7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC24.55■■□□□ 1.52
UPF3BQ9BZI7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
UPF3BQ9BZI7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
UPF3BQ9BZI7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
UPF3BQ9BZI7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
UPF3BQ9BZI7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC24.55■■□□□ 1.52
UPF3BQ9BZI7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.55■■□□□ 1.52
UPF3BQ9BZI7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
UPF3BQ9BZI7 KRT18P14-201ENST00000534205 1250 ntBASIC24.55■■□□□ 1.52
UPF3BQ9BZI7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.55■■□□□ 1.52
UPF3BQ9BZI7 AP001160.3-201ENST00000601484 763 ntBASIC24.55■■□□□ 1.52
UPF3BQ9BZI7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
UPF3BQ9BZI7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
UPF3BQ9BZI7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
UPF3BQ9BZI7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
UPF3BQ9BZI7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
UPF3BQ9BZI7 KRT16P2-201ENST00000414673 1423 ntBASIC24.54■■□□□ 1.52
UPF3BQ9BZI7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
UPF3BQ9BZI7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
UPF3BQ9BZI7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
UPF3BQ9BZI7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC24.54■■□□□ 1.52
UPF3BQ9BZI7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
UPF3BQ9BZI7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
UPF3BQ9BZI7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
UPF3BQ9BZI7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC24.54■■□□□ 1.52
UPF3BQ9BZI7 COX20-201ENST00000366528 568 ntTSL 2 BASIC24.54■■□□□ 1.52
UPF3BQ9BZI7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.54■■□□□ 1.52
UPF3BQ9BZI7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC24.54■■□□□ 1.52
UPF3BQ9BZI7 KRT18P61-201ENST00000585825 1298 ntBASIC24.54■■□□□ 1.52
UPF3BQ9BZI7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC24.54■■□□□ 1.52
UPF3BQ9BZI7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
UPF3BQ9BZI7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
UPF3BQ9BZI7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC24.53■■□□□ 1.52
UPF3BQ9BZI7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
UPF3BQ9BZI7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
UPF3BQ9BZI7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC24.53■■□□□ 1.52
UPF3BQ9BZI7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
UPF3BQ9BZI7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
UPF3BQ9BZI7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
UPF3BQ9BZI7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
UPF3BQ9BZI7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
UPF3BQ9BZI7 DUX4L2-201ENST00000561772 1275 ntBASIC24.53■■□□□ 1.52
UPF3BQ9BZI7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.53■■□□□ 1.52
UPF3BQ9BZI7 DUX4L6-201ENST00000626483 1275 ntBASIC24.53■■□□□ 1.52
UPF3BQ9BZI7 DUX4L1-201ENST00000627662 1275 ntBASIC24.53■■□□□ 1.52
UPF3BQ9BZI7 DUX4L8-201ENST00000629013 1275 ntBASIC24.53■■□□□ 1.52
UPF3BQ9BZI7 DUX4L3-201ENST00000630187 1275 ntBASIC24.53■■□□□ 1.52
UPF3BQ9BZI7 DUX4L7-201ENST00000630678 1275 ntBASIC24.53■■□□□ 1.52
UPF3BQ9BZI7 DUX4L5-201ENST00000630834 1275 ntBASIC24.53■■□□□ 1.52
UPF3BQ9BZI7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
UPF3BQ9BZI7 AL121603.2-201ENST00000557373 2117 ntBASIC24.53■■□□□ 1.52
UPF3BQ9BZI7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
UPF3BQ9BZI7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
UPF3BQ9BZI7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
UPF3BQ9BZI7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC24.52■■□□□ 1.52
UPF3BQ9BZI7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC24.52■■□□□ 1.52
UPF3BQ9BZI7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
UPF3BQ9BZI7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC24.52■■□□□ 1.52
UPF3BQ9BZI7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
UPF3BQ9BZI7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
UPF3BQ9BZI7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
UPF3BQ9BZI7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
UPF3BQ9BZI7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.52■■□□□ 1.52
UPF3BQ9BZI7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
UPF3BQ9BZI7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.52■■□□□ 1.52
UPF3BQ9BZI7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.52■■□□□ 1.52
UPF3BQ9BZI7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.52■■□□□ 1.52
UPF3BQ9BZI7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC24.52■■□□□ 1.52
UPF3BQ9BZI7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC24.52■■□□□ 1.52
UPF3BQ9BZI7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
UPF3BQ9BZI7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms