Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 AC012618.2-201ENST00000428058 849 ntBASIC10.8□□□□□ -0.68
KRTAP4-1Q9BYQ7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP4-1Q9BYQ7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP4-1Q9BYQ7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC10.8□□□□□ -0.68
KRTAP4-1Q9BYQ7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC10.8□□□□□ -0.68
KRTAP4-1Q9BYQ7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
KRTAP4-1Q9BYQ7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP4-1Q9BYQ7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC10.8□□□□□ -0.68
KRTAP4-1Q9BYQ7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP4-1Q9BYQ7 C2orf69P4-201ENST00000565394 541 ntBASIC10.8□□□□□ -0.68
KRTAP4-1Q9BYQ7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP4-1Q9BYQ7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC10.8□□□□□ -0.68
KRTAP4-1Q9BYQ7 LINC01023-201ENST00000606054 436 ntBASIC10.8□□□□□ -0.68
KRTAP4-1Q9BYQ7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC10.8□□□□□ -0.68
KRTAP4-1Q9BYQ7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC10.8□□□□□ -0.68
KRTAP4-1Q9BYQ7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC10.8□□□□□ -0.68
KRTAP4-1Q9BYQ7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC10.8□□□□□ -0.68
KRTAP4-1Q9BYQ7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP4-1Q9BYQ7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP4-1Q9BYQ7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC10.8□□□□□ -0.68
KRTAP4-1Q9BYQ7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
KRTAP4-1Q9BYQ7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP4-1Q9BYQ7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP4-1Q9BYQ7 AC127496.7-201ENST00000625110 1798 ntBASIC10.8□□□□□ -0.68
KRTAP4-1Q9BYQ7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 AC120498.8-201ENST00000614275 531 ntBASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 AC113410.3-201ENST00000623366 203 ntBASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 AL049637.2-201ENST00000641778 930 ntBASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
KRTAP4-1Q9BYQ7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 RCN1P1-201ENST00000400413 996 ntBASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 AC087499.1-201ENST00000418141 1075 ntBASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 ABHD17AP6-201ENST00000458502 1044 ntBASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 AC133681.1-201ENST00000465482 601 ntBASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 AL355075.4-201ENST00000554988 638 ntBASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP4-1Q9BYQ7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
KRTAP4-1Q9BYQ7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC10.77□□□□□ -0.68
KRTAP4-1Q9BYQ7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
KRTAP4-1Q9BYQ7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
KRTAP4-1Q9BYQ7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
KRTAP4-1Q9BYQ7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
KRTAP4-1Q9BYQ7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
KRTAP4-1Q9BYQ7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC10.77□□□□□ -0.69
KRTAP4-1Q9BYQ7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
KRTAP4-1Q9BYQ7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC10.77□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms